HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:17.9 nTPM
HPA Brain:30.3 nTPM
GTEx:17.9 nTPM
FANTOM5:33.1 Scaled Tags Per Million
Pig:28.4 nTPM
Mouse:74.8 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004101
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 26.6
2148 Female, age 91, left hemisphere 28.2
1911 Female, age 85, right hemisphere 28.0
1898 Male, age 80, left hemisphere 27.5
1855 Male, age 76, left hemisphere 25.6
2621 Female, age 67, right hemisphere 25.3
2529 Female, age 94, left hemisphere 24.9
Dentate gyrus
nTPM: 26.2
2246 Female, age 85, both hemispheres 28.8
2531 Female, age 67, both hemispheres 26.6
1927 Female, age 91, both hemispheres 26.3
2528 Male, age 74, both hemispheres 26.3
2530 Female, age 94, left hemisphere 25.8
2010 Male, age 76, both hemispheres 23.2
Entorhinal gyrus
nTPM: 29.8
2764 Male, age 80, right hemisphere 33.5
2613 Female, age 94, left hemisphere 31.9
1787 Male, age 76, left hemisphere 31.1
1938 Female, age 85, left hemisphere 28.5
2686 Male, age 75, right hemisphere 27.0
2117 Female, age 91, right hemisphere 26.9
Hippocampus, CA1
nTPM: 27.1
2749 Male, age 80, left hemisphere 29.6
2082 Female, age 91, right hemisphere 27.4
1873 Female, age 85, both hemispheres 26.9
2045 Male, age 76, both hemispheres 26.0
2527 Male, age 74, both hemispheres 25.8
Hippocampus, CA2
nTPM: 26.0
1892 Male, age 76, both hemispheres 27.5
2113 Female, age 91, right hemisphere 26.3
1963 Male, age 80, left hemisphere 26.2
2249 Male, age 74, both hemispheres 25.6
2437 Female, age 94, left hemisphere 25.4
1940 Female, age 85, left hemisphere 25.0
Hippocampus, CA3
nTPM: 28.6
2137 Male, age 80, left hemisphere 34.8
2620 Female, age 94, left hemisphere 29.8
1891 Female, age 85, both hemispheres 28.8
2861 Female, age 67, both hemispheres 28.1
1867 Male, age 76, both hemispheres 26.2
2436 Male, age 74, both hemispheres 24.0
Parahippocampal cortex
nTPM: 29.2
2693 Female, age 94, both hemispheres 32.1
1933 Female, age 85, both hemispheres 31.8
2532 Female, age 72, left hemisphere 30.7
1850 Male, age 80, both hemispheres 29.6
1990 Female, age 91, right hemisphere 28.3
2250 Female, age 67, right hemisphere 28.3
2692 Male, age 74, both hemispheres 28.1
2245 Female, age 91, both hemispheres 28.0
2018 Male, age 76, both hemispheres 27.9
2622 Female, age 67, right hemisphere 26.9
Perirhinal gyrus
nTPM: 30.3
1847 Female, age 91, left hemisphere 31.1
2848 Male, age 76, right hemisphere 30.9
1794 Male, age 80, right hemisphere 30.5
1841 Female, age 85, right hemisphere 30.5
2521 Female, age 94, right hemisphere 28.2
Subiculum
nTPM: 28.3
1977 Female, age 85, both hemispheres 31.2
2438 Female, age 94, left hemisphere 28.8
1901 Male, age 80, both hemispheres 28.1
2042 Male, age 76, both hemispheres 27.5
2729 Female, age 91, right hemisphere 27.3
2619 Male, age 74, both hemispheres 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 34.3
Min nTPM: 8.8
Std nTPM: 3.5
Median nTPM: 17.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 27.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 26.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 25.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.9
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 23.8
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 23.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 23.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 23.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.1
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 27.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.4
Pig sample Sample description nTPM
Subiculum
nTPM: 26.7
Samples: 4

Max nTPM: 29.0
Min nTPM: 24.8
Sample A Female 29.0
Sample B Female 28.0
Sample C Male 25.0
Sample D Male 24.8
Dorsal hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 30.8
Min nTPM: 23.0
Sample A Female 29.1
Sample B Female 30.8
Sample C Male 30.7
Sample D Male 23.0
Entorhinal cortex
nTPM: 25.9
Samples: 4

Max nTPM: 26.7
Min nTPM: 24.2
Sample A Female 26.7
Sample B Female 26.0
Sample C Male 24.2
Sample D Male 26.5
Ventral hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 34.7
Min nTPM: 22.1
Sample A Female 22.7
Sample B Female 22.1
Sample C Male 27.2
Sample D Male 34.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.8
Samples: 4

Max nTPM: 88.9
Min nTPM: 65.8
Sample A Male 71.4
Sample B Male 73.1
Sample C Female 65.8
Sample D Female 88.9
Hippocampal formation
nTPM: 56.7
Samples: 4

Max nTPM: 58.3
Min nTPM: 53.6
Sample A Male 58.2
Sample B Male 58.3
Sample C Female 56.7
Sample D Female 53.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
69169726 Antisense, RP_050321_04_B03, Mouse strain C57BL/6J (56 days, male) 10.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org