HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:4.1 nTPM
HPA Brain:48.5 nTPM
GTEx:4.1 nTPM
FANTOM5:36.5 Scaled Tags Per Million
Pig:57.5 nTPM
Mouse:16.5 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039812Antibody HPA040071
Glial cells LowLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 39.2
1898 Male, age 80, left hemisphere 45.0
2621 Female, age 67, right hemisphere 44.1
2148 Female, age 91, left hemisphere 39.3
2529 Female, age 94, left hemisphere 36.4
1855 Male, age 76, left hemisphere 36.3
1911 Female, age 85, right hemisphere 34.2
Dentate gyrus
nTPM: 37.7
1927 Female, age 91, both hemispheres 42.4
2530 Female, age 94, left hemisphere 41.7
2531 Female, age 67, both hemispheres 41.0
2246 Female, age 85, both hemispheres 34.9
2528 Male, age 74, both hemispheres 33.2
2010 Male, age 76, both hemispheres 33.0
Entorhinal gyrus
nTPM: 43.1
1938 Female, age 85, left hemisphere 46.4
2686 Male, age 75, right hemisphere 45.6
2764 Male, age 80, right hemisphere 44.0
2613 Female, age 94, left hemisphere 43.6
1787 Male, age 76, left hemisphere 41.6
2117 Female, age 91, right hemisphere 37.1
Hippocampus, CA1
nTPM: 42.0
2749 Male, age 80, left hemisphere 55.4
2082 Female, age 91, right hemisphere 41.6
2527 Male, age 74, both hemispheres 39.1
2045 Male, age 76, both hemispheres 37.6
1873 Female, age 85, both hemispheres 36.2
Hippocampus, CA2
nTPM: 39.0
1963 Male, age 80, left hemisphere 45.6
1892 Male, age 76, both hemispheres 42.1
2249 Male, age 74, both hemispheres 37.1
1940 Female, age 85, left hemisphere 36.8
2437 Female, age 94, left hemisphere 36.6
2113 Female, age 91, right hemisphere 35.9
Hippocampus, CA3
nTPM: 40.7
2137 Male, age 80, left hemisphere 48.2
2436 Male, age 74, both hemispheres 42.2
1867 Male, age 76, both hemispheres 41.4
1891 Female, age 85, both hemispheres 38.8
2620 Female, age 94, left hemisphere 38.2
2861 Female, age 67, both hemispheres 35.7
Parahippocampal cortex
nTPM: 41.7
1850 Male, age 80, both hemispheres 49.5
2250 Female, age 67, right hemisphere 44.8
2622 Female, age 67, right hemisphere 44.6
2693 Female, age 94, both hemispheres 42.4
1933 Female, age 85, both hemispheres 41.4
1990 Female, age 91, right hemisphere 40.2
2245 Female, age 91, both hemispheres 40.1
2018 Male, age 76, both hemispheres 39.8
2532 Female, age 72, left hemisphere 39.4
2692 Male, age 74, both hemispheres 34.4
Perirhinal gyrus
nTPM: 48.5
1794 Male, age 80, right hemisphere 52.3
1841 Female, age 85, right hemisphere 48.8
2521 Female, age 94, right hemisphere 47.9
1847 Female, age 91, left hemisphere 46.8
2848 Male, age 76, right hemisphere 46.8
Subiculum
nTPM: 38.0
1901 Male, age 80, both hemispheres 43.0
1977 Female, age 85, both hemispheres 42.3
2438 Female, age 94, left hemisphere 41.8
2619 Male, age 74, both hemispheres 35.0
2729 Female, age 91, right hemisphere 33.3
2042 Male, age 76, both hemispheres 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.1
Samples: 197

Max nTPM: 6.5
Min nTPM: 2.1
Std nTPM: 0.6
Median nTPM: 4.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 6.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 6.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 6.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 6.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 6.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 5.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 5.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 5.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 5.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 5.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 5.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.5
FF:10153-102I9 76 years, female 38.8
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.5
Pig sample Sample description nTPM
Subiculum
nTPM: 40.5
Samples: 4

Max nTPM: 44.9
Min nTPM: 37.5
Sample A Female 44.9
Sample B Female 39.4
Sample C Male 37.5
Sample D Male 40.2
Dorsal hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 37.9
Min nTPM: 34.0
Sample A Female 35.2
Sample B Female 37.9
Sample C Male 36.2
Sample D Male 34.0
Entorhinal cortex
nTPM: 57.5
Samples: 4

Max nTPM: 60.8
Min nTPM: 53.2
Sample A Female 60.8
Sample B Female 58.9
Sample C Male 56.9
Sample D Male 53.2
Ventral hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 39.5
Min nTPM: 31.5
Sample A Female 39.5
Sample B Female 38.5
Sample C Male 31.5
Sample D Male 33.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 20.8
Min nTPM: 14.0
Sample A Male 15.7
Sample B Male 15.6
Sample C Female 14.0
Sample D Female 20.8
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 17.4
Min nTPM: 11.7
Sample A Male 11.7
Sample B Male 16.4
Sample C Female 17.4
Sample D Female 11.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69407672 Antisense, RP_050414_02_B05, Mouse strain C57BL/6J (56 days, male) 2.7

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