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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
723.5
nTPM
FANTOM5:
1335.0
Scaled Tags Per Million
Pig:
749.9
nTPM
Allen mouse:
6.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
723.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 440.2
1984
Male, age 76, both hemispheres
504.6
2301
Female, age 85, both hemispheres
458.4
2090
Male, age 80, both hemispheres
407.4
2188
Female, age 91, both hemispheres
390.4
Dorsal cochlear nucleus nTPM: 490.7
2802
Male, age 74, right hemisphere
567.3
2058
Male, age 76, both hemispheres
514.1
2370
Male, age 61, both hemispheres
499.3
2187
Female, age 91, both hemispheres
444.0
2378
Male, age 80, both hemispheres
428.6
Dorsal tegmental nucleus nTPM: 529.2
2358
Male, age 61, both hemispheres
628.8
2083
Male, age 80, both hemispheres
553.9
2326
Male, age 74, both hemispheres
471.3
1936
Male, age 76, left hemisphere
462.7
Dorsolateral tegmental area nTPM: 522.8
2654
Male, age 80, both hemispheres
546.2
2141
Male, age 76, both hemispheres
524.1
2337
Male, age 61, both hemispheres
521.0
2360
Male, age 74, both hemispheres
516.6
2751
Female, age 85, both hemispheres
506.1
Kolliker-Fuse nucleus nTPM: 555.1
2163
Male, age 80, both hemispheres
695.4
2315
Male, age 76, right hemisphere
532.8
2793
Female, age 91, left hemisphere
437.1
Lateral lemniscal nuclei nTPM: 633.3
2169
Male, age 76, both hemispheres
861.1
2036
Male, age 80, both hemispheres
772.8
2746
Female, age 85, left hemisphere
660.5
2453
Male, age 74, right hemisphere
512.4
2320
Female, age 91, left hemisphere
360.0
Lateral parabrachial nucleus nTPM: 544.2
2139
Female, age 85, right hemisphere
847.0
2013
Male, age 80, both hemispheres
531.9
2790
Male, age 61, both hemispheres
424.0
2792
Male, age 76, both hemispheres
373.8
Lateral vestibular nucleus nTPM: 593.5
2184
Male, age 76, both hemispheres
695.6
2311
Male, age 80, both hemispheres
491.3
Locus coeruleus nTPM: 624.5
2123
Female, age 91, both hemispheres
905.6
2014
Male, age 55, unknown
644.5
2720
Male, age 74, both hemispheres
594.3
2788
Male, age 74, unknown
582.7
2317
Female, age 72, unknown
577.6
1980
Male, age 76, both hemispheres
565.4
2162
Male, age 80, both hemispheres
501.5
Medial parabrachial nucleus nTPM: 515.6
2854
Male, age 80, both hemispheres
619.5
2170
Female, age 91, both hemispheres
539.0
2786
Male, age 76, both hemispheres
490.8
2156
Male, age 61, both hemispheres
480.6
2463
Female, age 85, right hemisphere
448.1
Medial periolivary nuclei nTPM: 609.3
2171
Female, age 85, both hemispheres
929.3
2063
Male, age 76, both hemispheres
853.1
2791
Male, age 74, right hemisphere
492.4
2081
Male, age 80, both hemispheres
423.9
2458
Female, age 91, both hemispheres
347.6
Motor facial nucleus nTPM: 590.2
2062
Male, age 76, both hemispheres
900.6
2697
Female, age 85, both hemispheres
587.5
2365
Male, age 74, right hemisphere
571.9
2327
Male, age 80, both hemispheres
542.5
2795
Female, age 91, both hemispheres
514.8
2126
Male, age 61, both hemispheres
423.9
Motor trigeminal nucleus nTPM: 483.5
2079
Male, age 80, both hemispheres
606.6
2309
Male, age 76, both hemispheres
509.2
2335
Male, age 61, both hemispheres
508.6
2560
Male, age 74, both hemispheres
442.1
2321
Female, age 91, both hemispheres
351.2
Nuclei of the trapezoid body nTPM: 710.5
2159
Male, age 61, both hemispheres
932.9
2735
Female, age 85, both hemispheres
856.2
1983
Male, age 76, both hemispheres
810.8
2166
Male, age 80, both hemispheres
529.3
2368
Female, age 91, both hemispheres
423.4
Nucleus raphe magnus nTPM: 723.1
2160
Male, age 61, both hemispheres
1116.9
2172
Female, age 85, both hemispheres
946.9
2455
Male, age 74, both hemispheres
657.8
2051
Male, age 76, both hemispheres
632.1
2328
Male, age 80, both hemispheres
578.4
2459
Female, age 91, both hemispheres
406.8
Paramedian reticular nucleus nTPM: 615.9
2050
Female, age 85, both hemispheres
770.1
2057
Male, age 80, both hemispheres
662.6
2313
Male, age 61, both hemispheres
592.6
2052
Male, age 76, both hemispheres
438.2
Pedunculopontine tegmental nucleus nTPM: 538.2
2338
Male, age 61, both hemispheres
552.8
1921
Female, age 85, both hemispheres
536.0
2334
Male, age 80, both hemispheres
525.7
Pontine nuclei nTPM: 723.5
2787
Female, age 85, both hemispheres
1059.6
1863
Male, age 55, unknown
1012.3
2727
Male, age 61, right hemisphere
1008.6
1968
Male, age 76, left hemisphere
751.5
2109
Female, age 72, unknown
691.6
2115
Male, age 80, left hemisphere
501.9
2319
Female, age 91, both hemispheres
382.8
2454
Male, age 74, left hemisphere
379.6
Pontine raphe nucleus nTPM: 649.6
2122
Female, age 85, midline
758.6
2853
Male, age 76, midline
540.6
Posteroventral cochlear nucleus nTPM: 469.5
2752
Female, age 85, both hemispheres
669.8
2070
Male, age 76, both hemispheres
537.9
2371
Male, age 61, both hemispheres
469.6
2341
Male, age 80, both hemispheres
395.1
2135
Female, age 91, both hemispheres
275.0
Principal sensory trigeminal nucleus nTPM: 656.1
2158
Male, age 61, both hemispheres
946.3
2008
Male, age 80, left hemisphere
698.8
2324
Male, age 76, both hemispheres
628.5
2367
Female, age 91, left hemisphere
350.7
Reticular pontine nucleus, caudal nTPM: 515.0
2092
Male, age 76, both hemispheres
699.6
2332
Male, age 80, right hemisphere
634.6
2457
Female, age 91, both hemispheres
365.7
2559
Male, age 74, both hemispheres
360.1
Reticular pontine nucleus, oral nTPM: 512.3
2012
Female, age 85, both hemispheres
686.6
1939
Male, age 80, both hemispheres
540.3
2167
Male, age 76, both hemispheres
528.9
2361
Male, age 74, both hemispheres
445.0
2366
Female, age 91, both hemispheres
360.5
Reticulotegmental nucleus nTPM: 559.8
2325
Male, age 76, both hemispheres
703.9
2333
Male, age 80, both hemispheres
549.7
2452
Male, age 74, both hemispheres
499.8
2322
Female, age 91, both hemispheres
485.6
Spinal trigeminal nucleus, oral nTPM: 547.7
2737
Female, age 85, both hemispheres
628.1
2164
Male, age 80, both hemispheres
583.3
1978
Male, age 76, both hemispheres
431.6
Subcoeruleus area nTPM: 546.3
1958
Male, age 80, both hemispheres
610.7
2323
Female, age 91, left hemisphere
604.5
2089
Male, age 76, left hemisphere
566.0
2451
Male, age 74, both hemispheres
501.9
2369
Female, age 85, left hemisphere
448.5
Superior olive nTPM: 587.0
1875
Female, age 85, both hemispheres
818.2
2020
Male, age 76, both hemispheres
608.0
2364
Male, age 74, right hemisphere
556.6
2329
Male, age 80, right hemisphere
515.8
2561
Female, age 91, both hemispheres
436.6
Ventral periolivary nuclei nTPM: 660.8
2130
Female, age 85, both hemispheres
867.4
2165
Male, age 80, both hemispheres
759.5
2023
Male, age 76, both hemispheres
570.0
2794
Female, age 91, left hemisphere
446.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 539.1
2840
Female, age 85, both hemispheres
691.3
1959
Male, age 76, both hemispheres
611.9
2449
Male, age 74, both hemispheres
557.0
2161
Male, age 80, both hemispheres
528.8
2359
Male, age 61, both hemispheres
501.1
2456
Female, age 91, both hemispheres
344.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
749.9
Pig sample
Sample description
nTPM
Pons nTPM: 750.0
Samples: 4
Max nTPM: 975.9
Min nTPM: 546.6
Sample A
Female
975.9
Sample B
Female
546.6
Sample C
Male
606.2
Sample D
Male
871.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
