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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
116.3
nTPM
HPA Brain:
712.2
nTPM
GTEx:
116.3
nTPM
FANTOM5:
246.8
Scaled Tags Per Million
Pig:
433.2
nTPM
Mouse:
648.5
nTPM
Allen mouse:
13.5
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
116.3
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 116.3
Samples: 197
Max nTPM: 367.0
Min nTPM: 0.9
Std nTPM: 89.9
Median nTPM: 95.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
367.0
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
334.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
331.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
309.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
308.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
304.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
302.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
297.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
295.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
289.5
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
289.1
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
272.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
271.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
270.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
264.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
260.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
260.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
259.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
255.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
253.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
246.7
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
246.1
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
245.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
242.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
240.1
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
239.0
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
238.8
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
231.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
229.5
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
228.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
227.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
227.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
225.7
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
224.6
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
219.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
217.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
215.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
215.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
214.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
207.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
206.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
202.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
195.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
194.3
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
193.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
190.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
188.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
188.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
187.3
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
186.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
184.9
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
182.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
177.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
174.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
171.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
165.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
164.9
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
163.0
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
160.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
159.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
150.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
150.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
149.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
148.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
148.1
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
147.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
141.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
141.5
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
141.3
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
137.5
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
135.8
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
135.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
133.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
131.2
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
130.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
123.4
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
122.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
121.4
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
120.2
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
120.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
119.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
118.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
117.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
110.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
110.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
109.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
108.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
107.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
107.1
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
105.5
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
102.8
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
102.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
102.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
102.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
100.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
99.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
98.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
97.9
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
95.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
94.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
93.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
92.2
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
91.1
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
89.9
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
89.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
88.2
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
86.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
84.0
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
83.2
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
83.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
82.3
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
80.7
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
79.8
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
79.6
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
79.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
79.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
78.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
78.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
74.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
74.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
72.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
68.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
66.7
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
65.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
63.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
62.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
61.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
60.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
59.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
59.5
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
58.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
57.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
53.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
49.8
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
49.7
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
48.8
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
48.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
47.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
46.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
45.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
45.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
44.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
43.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
42.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
42.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
41.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
41.3
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
40.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
39.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
39.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
38.3
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
36.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
34.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
34.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
32.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
31.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
31.6
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
30.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
29.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
29.4
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
28.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
26.7
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
24.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
24.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
24.2
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
22.7
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
22.1
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
22.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
21.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
19.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
19.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
18.4
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
18.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
16.4
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
16.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
15.7
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
15.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
14.6
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
13.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
11.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
11.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
10.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
8.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
8.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
7.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
7.0
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
6.6
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
6.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
4.7
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
4.5
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
3.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
3.4
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
3.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
3.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
3.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1.5
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
0.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
648.5
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 648.5
Samples: 4
Max nTPM: 787.4
Min nTPM: 516.4
Sample A
Male
632.3
Sample B
Male
657.8
Sample C
Female
516.4
Sample D
Female
787.4
Hippocampal formation nTPM: 546.2
Samples: 4
Max nTPM: 653.7
Min nTPM: 461.0
Sample A
Male
469.6
Sample B
Male
600.6
Sample C
Female
653.7
Sample D
Female
461.0
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.