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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
251.0
nTPM
FANTOM5:
398.6
Scaled Tags Per Million
Pig:
142.4
nTPM
Allen mouse:
3.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
251.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 224.5
2090
Male, age 80, both hemispheres
269.5
2188
Female, age 91, both hemispheres
246.1
2301
Female, age 85, both hemispheres
227.1
1984
Male, age 76, both hemispheres
155.3
Dorsal cochlear nucleus nTPM: 225.7
2378
Male, age 80, both hemispheres
278.1
2802
Male, age 74, right hemisphere
236.2
2187
Female, age 91, both hemispheres
219.3
2058
Male, age 76, both hemispheres
200.5
2370
Male, age 61, both hemispheres
194.6
Dorsal tegmental nucleus nTPM: 185.8
2083
Male, age 80, both hemispheres
267.6
2326
Male, age 74, both hemispheres
211.0
1936
Male, age 76, left hemisphere
159.2
2358
Male, age 61, both hemispheres
105.5
Dorsolateral tegmental area nTPM: 209.6
2751
Female, age 85, both hemispheres
299.3
2654
Male, age 80, both hemispheres
264.3
2337
Male, age 61, both hemispheres
201.2
2360
Male, age 74, both hemispheres
167.3
2141
Male, age 76, both hemispheres
115.8
Kolliker-Fuse nucleus nTPM: 211.5
2793
Female, age 91, left hemisphere
243.4
2315
Male, age 76, right hemisphere
209.0
2163
Male, age 80, both hemispheres
181.9
Lateral lemniscal nuclei nTPM: 207.7
2036
Male, age 80, both hemispheres
240.3
2320
Female, age 91, left hemisphere
230.7
2746
Female, age 85, left hemisphere
209.8
2453
Male, age 74, right hemisphere
191.5
2169
Male, age 76, both hemispheres
166.3
Lateral parabrachial nucleus nTPM: 246.3
2792
Male, age 76, both hemispheres
337.2
2013
Male, age 80, both hemispheres
271.4
2790
Male, age 61, both hemispheres
193.1
2139
Female, age 85, right hemisphere
183.7
Lateral vestibular nucleus nTPM: 189.3
2311
Male, age 80, both hemispheres
208.7
2184
Male, age 76, both hemispheres
170.0
Locus coeruleus nTPM: 127.1
2162
Male, age 80, both hemispheres
152.1
2317
Female, age 72, unknown
144.4
2720
Male, age 74, both hemispheres
133.6
2788
Male, age 74, unknown
128.6
2123
Female, age 91, both hemispheres
125.2
2014
Male, age 55, unknown
116.8
1980
Male, age 76, both hemispheres
89.0
Medial parabrachial nucleus nTPM: 204.2
2463
Female, age 85, right hemisphere
238.7
2170
Female, age 91, both hemispheres
223.9
2854
Male, age 80, both hemispheres
211.5
2786
Male, age 76, both hemispheres
190.8
2156
Male, age 61, both hemispheres
155.8
Medial periolivary nuclei nTPM: 200.3
2081
Male, age 80, both hemispheres
256.7
2791
Male, age 74, right hemisphere
231.3
2458
Female, age 91, both hemispheres
202.1
2063
Male, age 76, both hemispheres
182.6
2171
Female, age 85, both hemispheres
128.8
Motor facial nucleus nTPM: 206.5
2126
Male, age 61, both hemispheres
259.8
2365
Male, age 74, right hemisphere
230.1
2697
Female, age 85, both hemispheres
211.1
2795
Female, age 91, both hemispheres
199.0
2327
Male, age 80, both hemispheres
189.6
2062
Male, age 76, both hemispheres
149.6
Motor trigeminal nucleus nTPM: 196.3
2560
Male, age 74, both hemispheres
241.8
2321
Female, age 91, both hemispheres
213.7
2309
Male, age 76, both hemispheres
194.3
2079
Male, age 80, both hemispheres
176.2
2335
Male, age 61, both hemispheres
155.3
Nuclei of the trapezoid body nTPM: 185.8
2368
Female, age 91, both hemispheres
218.9
2166
Male, age 80, both hemispheres
218.4
2159
Male, age 61, both hemispheres
188.3
1983
Male, age 76, both hemispheres
184.8
2735
Female, age 85, both hemispheres
118.6
Nucleus raphe magnus nTPM: 181.8
2459
Female, age 91, both hemispheres
235.1
2328
Male, age 80, both hemispheres
230.8
2051
Male, age 76, both hemispheres
221.3
2455
Male, age 74, both hemispheres
176.9
2160
Male, age 61, both hemispheres
121.8
2172
Female, age 85, both hemispheres
105.2
Paramedian reticular nucleus nTPM: 230.3
2052
Male, age 76, both hemispheres
277.2
2057
Male, age 80, both hemispheres
236.9
2050
Female, age 85, both hemispheres
207.3
2313
Male, age 61, both hemispheres
199.9
Pedunculopontine tegmental nucleus nTPM: 184.3
2334
Male, age 80, both hemispheres
204.9
1921
Female, age 85, both hemispheres
177.0
2338
Male, age 61, both hemispheres
170.8
Pontine nuclei nTPM: 222.6
2454
Male, age 74, left hemisphere
306.9
2109
Female, age 72, unknown
262.1
2319
Female, age 91, both hemispheres
229.6
2115
Male, age 80, left hemisphere
226.3
1863
Male, age 55, unknown
212.2
1968
Male, age 76, left hemisphere
204.7
2727
Male, age 61, right hemisphere
190.8
2787
Female, age 85, both hemispheres
148.1
Pontine raphe nucleus nTPM: 156.2
2853
Male, age 76, midline
158.9
2122
Female, age 85, midline
153.4
Posteroventral cochlear nucleus nTPM: 251.0
2341
Male, age 80, both hemispheres
314.6
2070
Male, age 76, both hemispheres
272.7
2135
Female, age 91, both hemispheres
267.4
2371
Male, age 61, both hemispheres
225.4
2752
Female, age 85, both hemispheres
175.2
Principal sensory trigeminal nucleus nTPM: 176.1
2367
Female, age 91, left hemisphere
238.7
2008
Male, age 80, left hemisphere
171.1
2324
Male, age 76, both hemispheres
162.0
2158
Male, age 61, both hemispheres
132.5
Reticular pontine nucleus, caudal nTPM: 232.3
2559
Male, age 74, both hemispheres
266.2
2457
Female, age 91, both hemispheres
245.3
2092
Male, age 76, both hemispheres
245.0
2332
Male, age 80, right hemisphere
172.8
Reticular pontine nucleus, oral nTPM: 248.0
2361
Male, age 74, both hemispheres
275.8
1939
Male, age 80, both hemispheres
269.3
2366
Female, age 91, both hemispheres
245.1
2012
Female, age 85, both hemispheres
226.2
2167
Male, age 76, both hemispheres
223.5
Reticulotegmental nucleus nTPM: 179.5
2333
Male, age 80, both hemispheres
204.0
2452
Male, age 74, both hemispheres
202.4
2322
Female, age 91, both hemispheres
196.2
2325
Male, age 76, both hemispheres
115.3
Spinal trigeminal nucleus, oral nTPM: 189.2
1978
Male, age 76, both hemispheres
205.6
2164
Male, age 80, both hemispheres
201.7
2737
Female, age 85, both hemispheres
160.2
Subcoeruleus area nTPM: 202.8
2369
Female, age 85, left hemisphere
346.9
1958
Male, age 80, both hemispheres
189.8
2451
Male, age 74, both hemispheres
167.3
2089
Male, age 76, left hemisphere
165.4
2323
Female, age 91, left hemisphere
144.6
Superior olive nTPM: 224.6
2020
Male, age 76, both hemispheres
264.2
2329
Male, age 80, right hemisphere
242.3
2364
Male, age 74, right hemisphere
237.5
1875
Female, age 85, both hemispheres
190.1
2561
Female, age 91, both hemispheres
189.1
Ventral periolivary nuclei nTPM: 190.2
2023
Male, age 76, both hemispheres
314.3
2165
Male, age 80, both hemispheres
180.1
2794
Female, age 91, left hemisphere
143.2
2130
Female, age 85, both hemispheres
123.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 219.9
2456
Female, age 91, both hemispheres
244.1
2840
Female, age 85, both hemispheres
231.4
2359
Male, age 61, both hemispheres
221.2
2161
Male, age 80, both hemispheres
218.4
1959
Male, age 76, both hemispheres
210.6
2449
Male, age 74, both hemispheres
193.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
142.4
Pig sample
Sample description
nTPM
Pons nTPM: 142.4
Samples: 4
Max nTPM: 174.9
Min nTPM: 117.0
Sample A
Female
117.0
Sample B
Female
128.2
Sample C
Male
149.6
Sample D
Male
174.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
