HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:42.2 nTPM
HPA Brain:29.1 nTPM
GTEx:42.2 nTPM
FANTOM5:27.6 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:19.8 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025016
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.1
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
1898 Male, age 80, left hemisphere 34.2
2529 Female, age 94, left hemisphere 33.2
2621 Female, age 67, right hemisphere 28.5
1911 Female, age 85, right hemisphere 26.1
2148 Female, age 91, left hemisphere 23.7
1855 Male, age 76, left hemisphere 23.0
Dentate gyrus
nTPM: 26.9
2530 Female, age 94, left hemisphere 37.7
2010 Male, age 76, both hemispheres 30.7
2528 Male, age 74, both hemispheres 27.3
2531 Female, age 67, both hemispheres 24.6
1927 Female, age 91, both hemispheres 21.6
2246 Female, age 85, both hemispheres 19.4
Entorhinal gyrus
nTPM: 28.0
2117 Female, age 91, right hemisphere 36.2
2764 Male, age 80, right hemisphere 32.2
1787 Male, age 76, left hemisphere 30.3
2686 Male, age 75, right hemisphere 23.4
1938 Female, age 85, left hemisphere 23.2
2613 Female, age 94, left hemisphere 22.5
Hippocampus, CA1
nTPM: 25.9
1873 Female, age 85, both hemispheres 30.8
2749 Male, age 80, left hemisphere 29.6
2527 Male, age 74, both hemispheres 26.0
2082 Female, age 91, right hemisphere 23.8
2045 Male, age 76, both hemispheres 19.1
Hippocampus, CA2
nTPM: 28.3
1963 Male, age 80, left hemisphere 37.2
2249 Male, age 74, both hemispheres 32.3
2437 Female, age 94, left hemisphere 27.0
2113 Female, age 91, right hemisphere 24.9
1892 Male, age 76, both hemispheres 24.4
1940 Female, age 85, left hemisphere 23.8
Hippocampus, CA3
nTPM: 25.3
2436 Male, age 74, both hemispheres 28.2
1891 Female, age 85, both hemispheres 28.1
1867 Male, age 76, both hemispheres 26.9
2620 Female, age 94, left hemisphere 26.8
2861 Female, age 67, both hemispheres 22.9
2137 Male, age 80, left hemisphere 18.5
Parahippocampal cortex
nTPM: 22.1
2692 Male, age 74, both hemispheres 27.3
1990 Female, age 91, right hemisphere 25.8
2245 Female, age 91, both hemispheres 25.8
2018 Male, age 76, both hemispheres 22.8
2532 Female, age 72, left hemisphere 21.2
1850 Male, age 80, both hemispheres 21.1
1933 Female, age 85, both hemispheres 20.6
2622 Female, age 67, right hemisphere 20.3
2250 Female, age 67, right hemisphere 19.7
2693 Female, age 94, both hemispheres 16.4
Perirhinal gyrus
nTPM: 21.0
1794 Male, age 80, right hemisphere 22.4
2848 Male, age 76, right hemisphere 21.9
1847 Female, age 91, left hemisphere 21.7
1841 Female, age 85, right hemisphere 19.7
2521 Female, age 94, right hemisphere 19.4
Subiculum
nTPM: 29.1
1901 Male, age 80, both hemispheres 34.5
2042 Male, age 76, both hemispheres 31.2
2619 Male, age 74, both hemispheres 29.5
1977 Female, age 85, both hemispheres 28.5
2438 Female, age 94, left hemisphere 25.7
2729 Female, age 91, right hemisphere 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.2
Samples: 197

Max nTPM: 79.1
Min nTPM: 19.0
Std nTPM: 10.1
Median nTPM: 41.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 79.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 78.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 72.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 68.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 68.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 65.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 65.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 64.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 62.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 61.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.6
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 27.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.6
Pig sample Sample description nTPM
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 28.1
Min nTPM: 18.7
Sample A Female 28.1
Sample B Female 20.4
Sample C Male 21.8
Sample D Male 18.7
Dorsal hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 26.6
Min nTPM: 17.1
Sample A Female 26.6
Sample B Female 23.1
Sample C Male 25.1
Sample D Male 17.1
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.9
Sample A Female 21.2
Sample B Female 25.8
Sample C Male 26.6
Sample D Male 20.9
Ventral hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 30.5
Min nTPM: 18.9
Sample A Female 21.7
Sample B Female 18.9
Sample C Male 30.5
Sample D Male 23.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 20.1
Min nTPM: 16.6
Sample A Male 16.6
Sample B Male 18.1
Sample C Female 20.1
Sample D Female 19.7
Hippocampal formation
nTPM: 19.8
Samples: 4

Max nTPM: 20.8
Min nTPM: 17.5
Sample A Male 20.8
Sample B Male 20.4
Sample C Female 17.5
Sample D Female 20.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69201636 Antisense, RP_050324_03_A01, Mouse strain C57BL/6J (56 days, male) 2.1

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