HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:43.3 nTPM
HPA Brain:73.7 nTPM
GTEx:43.3 nTPM
FANTOM5:7.6 Scaled Tags Per Million
Pig:59.8 nTPM
Mouse:96.7 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037974
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.7
Sample id Sample description nTPM
Hippocampus
nTPM: 70.6
1855 Male, age 76, left hemisphere 94.7
2621 Female, age 67, right hemisphere 87.2
2148 Female, age 91, left hemisphere 80.8
1898 Male, age 80, left hemisphere 62.2
1911 Female, age 85, right hemisphere 56.2
2529 Female, age 94, left hemisphere 42.6
Dentate gyrus
nTPM: 65.3
1927 Female, age 91, both hemispheres 86.2
2530 Female, age 94, left hemisphere 69.2
2531 Female, age 67, both hemispheres 64.2
2246 Female, age 85, both hemispheres 62.8
2010 Male, age 76, both hemispheres 58.3
2528 Male, age 74, both hemispheres 51.0
Entorhinal gyrus
nTPM: 59.4
2613 Female, age 94, left hemisphere 90.4
1787 Male, age 76, left hemisphere 63.5
1938 Female, age 85, left hemisphere 61.4
2686 Male, age 75, right hemisphere 55.3
2764 Male, age 80, right hemisphere 53.1
2117 Female, age 91, right hemisphere 32.5
Hippocampus, CA1
nTPM: 70.8
2749 Male, age 80, left hemisphere 123.8
1873 Female, age 85, both hemispheres 68.8
2045 Male, age 76, both hemispheres 64.6
2527 Male, age 74, both hemispheres 52.6
2082 Female, age 91, right hemisphere 44.0
Hippocampus, CA2
nTPM: 62.3
1892 Male, age 76, both hemispheres 96.5
1963 Male, age 80, left hemisphere 83.7
2437 Female, age 94, left hemisphere 55.8
2249 Male, age 74, both hemispheres 47.1
2113 Female, age 91, right hemisphere 45.3
1940 Female, age 85, left hemisphere 45.1
Hippocampus, CA3
nTPM: 73.7
2137 Male, age 80, left hemisphere 109.5
2861 Female, age 67, both hemispheres 95.0
2620 Female, age 94, left hemisphere 94.8
1867 Male, age 76, both hemispheres 62.3
1891 Female, age 85, both hemispheres 43.0
2436 Male, age 74, both hemispheres 37.4
Parahippocampal cortex
nTPM: 61.9
2245 Female, age 91, both hemispheres 83.8
2622 Female, age 67, right hemisphere 80.3
2250 Female, age 67, right hemisphere 78.0
2693 Female, age 94, both hemispheres 69.2
2532 Female, age 72, left hemisphere 58.4
1933 Female, age 85, both hemispheres 57.0
2692 Male, age 74, both hemispheres 53.8
1990 Female, age 91, right hemisphere 51.9
1850 Male, age 80, both hemispheres 51.1
2018 Male, age 76, both hemispheres 35.4
Perirhinal gyrus
nTPM: 61.0
2521 Female, age 94, right hemisphere 86.6
1847 Female, age 91, left hemisphere 64.0
1794 Male, age 80, right hemisphere 54.9
1841 Female, age 85, right hemisphere 54.6
2848 Male, age 76, right hemisphere 45.1
Subiculum
nTPM: 48.6
1901 Male, age 80, both hemispheres 54.7
2619 Male, age 74, both hemispheres 52.2
2438 Female, age 94, left hemisphere 47.7
1977 Female, age 85, both hemispheres 47.1
2729 Female, age 91, right hemisphere 46.0
2042 Male, age 76, both hemispheres 44.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.3
Samples: 197

Max nTPM: 94.7
Min nTPM: 6.1
Std nTPM: 15.8
Median nTPM: 43.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 94.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 86.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 83.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 81.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 78.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 75.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 75.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 74.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 73.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 72.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 72.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.6
FF:10153-102I9 76 years, female 9.1
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.8
Pig sample Sample description nTPM
Subiculum
nTPM: 55.9
Samples: 4

Max nTPM: 66.6
Min nTPM: 45.5
Sample A Female 66.6
Sample B Female 45.5
Sample C Male 60.5
Sample D Male 51.0
Dorsal hippocampus
nTPM: 57.9
Samples: 4

Max nTPM: 64.0
Min nTPM: 48.4
Sample A Female 64.0
Sample B Female 63.8
Sample C Male 55.2
Sample D Male 48.4
Entorhinal cortex
nTPM: 59.8
Samples: 4

Max nTPM: 68.8
Min nTPM: 48.0
Sample A Female 65.1
Sample B Female 48.0
Sample C Male 68.8
Sample D Male 57.2
Ventral hippocampus
nTPM: 56.5
Samples: 4

Max nTPM: 72.6
Min nTPM: 38.3
Sample A Female 49.2
Sample B Female 38.3
Sample C Male 72.6
Sample D Male 65.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 96.7
Samples: 4

Max nTPM: 116.6
Min nTPM: 83.4
Sample A Male 94.3
Sample B Male 92.6
Sample C Female 83.4
Sample D Female 116.6
Hippocampal formation
nTPM: 80.7
Samples: 4

Max nTPM: 95.5
Min nTPM: 66.8
Sample A Male 66.8
Sample B Male 90.5
Sample C Female 95.5
Sample D Female 69.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
71211689 Antisense, RP_050816_02_B08, Mouse strain C57BL/6J (56 days, male) 4.8

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