HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:9.4 nTPM
HPA Brain:142.0 nTPM
GTEx:9.4 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Pig:9.0 nTPM
Mouse:40.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036938
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 142.0
Sample id Sample description nTPM
Hippocampus
nTPM: 126.2
2148 Female, age 91, left hemisphere 163.3
1911 Female, age 85, right hemisphere 137.6
2621 Female, age 67, right hemisphere 125.3
2529 Female, age 94, left hemisphere 121.7
1855 Male, age 76, left hemisphere 121.1
1898 Male, age 80, left hemisphere 88.3
Dentate gyrus
nTPM: 138.3
2246 Female, age 85, both hemispheres 159.6
2531 Female, age 67, both hemispheres 155.7
2528 Male, age 74, both hemispheres 146.7
1927 Female, age 91, both hemispheres 128.8
2010 Male, age 76, both hemispheres 122.6
2530 Female, age 94, left hemisphere 116.3
Entorhinal gyrus
nTPM: 137.1
2613 Female, age 94, left hemisphere 171.9
2764 Male, age 80, right hemisphere 143.4
1787 Male, age 76, left hemisphere 131.2
2686 Male, age 75, right hemisphere 130.6
2117 Female, age 91, right hemisphere 124.6
1938 Female, age 85, left hemisphere 120.9
Hippocampus, CA1
nTPM: 140.3
2082 Female, age 91, right hemisphere 156.1
2749 Male, age 80, left hemisphere 141.9
1873 Female, age 85, both hemispheres 136.6
2045 Male, age 76, both hemispheres 135.1
2527 Male, age 74, both hemispheres 131.9
Hippocampus, CA2
nTPM: 131.0
2113 Female, age 91, right hemisphere 154.1
2249 Male, age 74, both hemispheres 153.3
1940 Female, age 85, left hemisphere 127.7
1963 Male, age 80, left hemisphere 123.0
2437 Female, age 94, left hemisphere 119.2
1892 Male, age 76, both hemispheres 108.9
Hippocampus, CA3
nTPM: 136.9
2620 Female, age 94, left hemisphere 169.8
2137 Male, age 80, left hemisphere 168.3
2861 Female, age 67, both hemispheres 123.9
1891 Female, age 85, both hemispheres 123.2
2436 Male, age 74, both hemispheres 123.2
1867 Male, age 76, both hemispheres 112.8
Parahippocampal cortex
nTPM: 142.0
2532 Female, age 72, left hemisphere 156.7
2622 Female, age 67, right hemisphere 152.2
2693 Female, age 94, both hemispheres 152.2
2245 Female, age 91, both hemispheres 151.1
2250 Female, age 67, right hemisphere 150.3
1933 Female, age 85, both hemispheres 139.4
1990 Female, age 91, right hemisphere 135.0
2692 Male, age 74, both hemispheres 135.0
1850 Male, age 80, both hemispheres 131.4
2018 Male, age 76, both hemispheres 117.1
Perirhinal gyrus
nTPM: 141.0
2848 Male, age 76, right hemisphere 167.9
2521 Female, age 94, right hemisphere 156.0
1841 Female, age 85, right hemisphere 141.0
1794 Male, age 80, right hemisphere 125.9
1847 Female, age 91, left hemisphere 114.2
Subiculum
nTPM: 132.8
2729 Female, age 91, right hemisphere 155.3
1977 Female, age 85, both hemispheres 143.9
2619 Male, age 74, both hemispheres 138.8
2438 Female, age 94, left hemisphere 126.5
1901 Male, age 80, both hemispheres 118.4
2042 Male, age 76, both hemispheres 114.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 15.0
Min nTPM: 6.2
Std nTPM: 1.5
Median nTPM: 9.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 15.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 14.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 14.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 13.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 13.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 12.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 12.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 12.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 12.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.7
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.0
Pig sample Sample description nTPM
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.7
Sample A Female 9.7
Sample B Female 8.5
Sample C Male 7.7
Sample D Male 9.9
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 9.0
Min nTPM: 8.0
Sample A Female 9.0
Sample B Female 8.0
Sample C Male 8.2
Sample D Male 8.6
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.7
Sample A Female 7.7
Sample B Female 9.1
Sample C Male 8.2
Sample D Male 8.4
Ventral hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.9
Sample A Female 8.3
Sample B Female 8.5
Sample C Male 6.9
Sample D Male 8.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.2
Samples: 4

Max nTPM: 43.7
Min nTPM: 33.1
Sample A Male 38.0
Sample B Male 43.7
Sample C Female 37.9
Sample D Female 33.1
Hippocampal formation
nTPM: 40.1
Samples: 4

Max nTPM: 46.6
Min nTPM: 37.3
Sample A Male 46.6
Sample B Male 38.6
Sample C Female 37.3
Sample D Female 37.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
67765722 Antisense, RP_040916_01_F06, Mouse strain C57BL/6J (56 days, male) 0.6

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