HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:31.4 nTPM
HPA Brain:80.5 nTPM
GTEx:31.4 nTPM
FANTOM5:87.7 Scaled Tags Per Million
Pig:69.0 nTPM
Mouse:80.0 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072204
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.5
Sample id Sample description nTPM
Hippocampus
nTPM: 70.5
1898 Male, age 80, left hemisphere 81.6
1855 Male, age 76, left hemisphere 76.6
1911 Female, age 85, right hemisphere 67.7
2148 Female, age 91, left hemisphere 67.4
2529 Female, age 94, left hemisphere 65.8
2621 Female, age 67, right hemisphere 64.0
Dentate gyrus
nTPM: 71.3
2010 Male, age 76, both hemispheres 75.6
1927 Female, age 91, both hemispheres 74.2
2246 Female, age 85, both hemispheres 73.8
2530 Female, age 94, left hemisphere 71.5
2528 Male, age 74, both hemispheres 68.9
2531 Female, age 67, both hemispheres 63.7
Entorhinal gyrus
nTPM: 69.6
1938 Female, age 85, left hemisphere 79.8
2764 Male, age 80, right hemisphere 70.3
2117 Female, age 91, right hemisphere 68.8
1787 Male, age 76, left hemisphere 68.4
2686 Male, age 75, right hemisphere 66.1
2613 Female, age 94, left hemisphere 64.1
Hippocampus, CA1
nTPM: 80.5
2749 Male, age 80, left hemisphere 110.1
2045 Male, age 76, both hemispheres 81.0
1873 Female, age 85, both hemispheres 80.5
2527 Male, age 74, both hemispheres 70.9
2082 Female, age 91, right hemisphere 60.2
Hippocampus, CA2
nTPM: 70.4
1963 Male, age 80, left hemisphere 84.2
1892 Male, age 76, both hemispheres 81.3
1940 Female, age 85, left hemisphere 65.9
2249 Male, age 74, both hemispheres 65.1
2113 Female, age 91, right hemisphere 64.5
2437 Female, age 94, left hemisphere 61.4
Hippocampus, CA3
nTPM: 69.7
2137 Male, age 80, left hemisphere 92.8
1891 Female, age 85, both hemispheres 73.9
1867 Male, age 76, both hemispheres 69.6
2620 Female, age 94, left hemisphere 65.8
2436 Male, age 74, both hemispheres 58.9
2861 Female, age 67, both hemispheres 57.4
Parahippocampal cortex
nTPM: 66.0
1850 Male, age 80, both hemispheres 79.7
1933 Female, age 85, both hemispheres 76.3
2532 Female, age 72, left hemisphere 71.4
2692 Male, age 74, both hemispheres 65.6
1990 Female, age 91, right hemisphere 64.8
2245 Female, age 91, both hemispheres 63.7
2693 Female, age 94, both hemispheres 60.5
2250 Female, age 67, right hemisphere 60.0
2018 Male, age 76, both hemispheres 59.5
2622 Female, age 67, right hemisphere 58.5
Perirhinal gyrus
nTPM: 76.0
1847 Female, age 91, left hemisphere 86.0
1794 Male, age 80, right hemisphere 79.6
1841 Female, age 85, right hemisphere 78.0
2848 Male, age 76, right hemisphere 71.0
2521 Female, age 94, right hemisphere 65.4
Subiculum
nTPM: 67.7
1901 Male, age 80, both hemispheres 76.3
1977 Female, age 85, both hemispheres 73.4
2042 Male, age 76, both hemispheres 66.2
2729 Female, age 91, right hemisphere 65.9
2438 Female, age 94, left hemisphere 62.3
2619 Male, age 74, both hemispheres 61.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.4
Samples: 197

Max nTPM: 49.3
Min nTPM: 12.3
Std nTPM: 5.6
Median nTPM: 30.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 49.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 49.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 47.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 47.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 46.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 45.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 45.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 43.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 42.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 42.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.7
FF:10169-103B7 60 years, female 88.2
FF:10153-102I9 76 years, female 87.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.0
Pig sample Sample description nTPM
Subiculum
nTPM: 55.4
Samples: 4

Max nTPM: 64.5
Min nTPM: 50.5
Sample A Female 64.5
Sample B Female 55.3
Sample C Male 51.1
Sample D Male 50.5
Dorsal hippocampus
nTPM: 69.0
Samples: 4

Max nTPM: 81.8
Min nTPM: 56.6
Sample A Female 81.8
Sample B Female 75.3
Sample C Male 56.6
Sample D Male 62.2
Entorhinal cortex
nTPM: 57.5
Samples: 4

Max nTPM: 60.9
Min nTPM: 51.2
Sample A Female 60.9
Sample B Female 59.4
Sample C Male 58.3
Sample D Male 51.2
Ventral hippocampus
nTPM: 62.0
Samples: 4

Max nTPM: 67.3
Min nTPM: 51.4
Sample A Female 67.3
Sample B Female 51.4
Sample C Male 64.1
Sample D Male 65.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.0
Samples: 4

Max nTPM: 73.1
Min nTPM: 63.5
Sample A Male 63.5
Sample B Male 64.5
Sample C Female 71.0
Sample D Female 73.1
Hippocampal formation
nTPM: 80.0
Samples: 4

Max nTPM: 94.5
Min nTPM: 71.0
Sample A Male 72.7
Sample B Male 81.6
Sample C Female 94.5
Sample D Female 71.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
532691 Antisense, RP_040825_01_E02, Mouse strain C57BL/6J (56 days, male) 5.1

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