HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:15.6 nTPM
HPA Brain:29.4 nTPM
GTEx:15.6 nTPM
FANTOM5:22.6 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:12.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007722
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
1911 Female, age 85, right hemisphere 27.0
2529 Female, age 94, left hemisphere 26.2
2621 Female, age 67, right hemisphere 24.9
1898 Male, age 80, left hemisphere 19.6
2148 Female, age 91, left hemisphere 19.2
1855 Male, age 76, left hemisphere 18.6
Dentate gyrus
nTPM: 24.0
2530 Female, age 94, left hemisphere 43.5
2010 Male, age 76, both hemispheres 28.0
2531 Female, age 67, both hemispheres 19.9
2246 Female, age 85, both hemispheres 18.7
2528 Male, age 74, both hemispheres 18.0
1927 Female, age 91, both hemispheres 16.1
Entorhinal gyrus
nTPM: 27.2
2117 Female, age 91, right hemisphere 45.5
2764 Male, age 80, right hemisphere 31.0
2686 Male, age 75, right hemisphere 26.5
2613 Female, age 94, left hemisphere 23.0
1938 Female, age 85, left hemisphere 19.3
1787 Male, age 76, left hemisphere 18.1
Hippocampus, CA1
nTPM: 18.1
2527 Male, age 74, both hemispheres 21.8
2749 Male, age 80, left hemisphere 19.8
2082 Female, age 91, right hemisphere 19.4
1873 Female, age 85, both hemispheres 18.5
2045 Male, age 76, both hemispheres 11.2
Hippocampus, CA2
nTPM: 23.5
1963 Male, age 80, left hemisphere 32.2
2249 Male, age 74, both hemispheres 26.9
1940 Female, age 85, left hemisphere 24.4
2437 Female, age 94, left hemisphere 23.0
2113 Female, age 91, right hemisphere 21.5
1892 Male, age 76, both hemispheres 13.3
Hippocampus, CA3
nTPM: 18.7
1891 Female, age 85, both hemispheres 34.4
1867 Male, age 76, both hemispheres 21.7
2436 Male, age 74, both hemispheres 18.9
2137 Male, age 80, left hemisphere 17.7
2620 Female, age 94, left hemisphere 10.1
2861 Female, age 67, both hemispheres 9.3
Parahippocampal cortex
nTPM: 21.8
2532 Female, age 72, left hemisphere 31.6
2692 Male, age 74, both hemispheres 28.9
1990 Female, age 91, right hemisphere 28.2
2018 Male, age 76, both hemispheres 26.1
2245 Female, age 91, both hemispheres 21.8
1850 Male, age 80, both hemispheres 18.9
1933 Female, age 85, both hemispheres 16.1
2693 Female, age 94, both hemispheres 16.0
2250 Female, age 67, right hemisphere 15.7
2622 Female, age 67, right hemisphere 14.9
Perirhinal gyrus
nTPM: 13.1
2521 Female, age 94, right hemisphere 14.1
1794 Male, age 80, right hemisphere 13.9
2848 Male, age 76, right hemisphere 13.2
1847 Female, age 91, left hemisphere 13.1
1841 Female, age 85, right hemisphere 11.1
Subiculum
nTPM: 29.4
2042 Male, age 76, both hemispheres 41.9
1901 Male, age 80, both hemispheres 37.9
1977 Female, age 85, both hemispheres 31.7
2729 Female, age 91, right hemisphere 21.9
2619 Male, age 74, both hemispheres 21.8
2438 Female, age 94, left hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 45.8
Min nTPM: 2.6
Std nTPM: 7.5
Median nTPM: 14.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 45.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 43.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 38.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 37.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 36.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 35.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 32.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 31.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 30.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 30.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 28.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.6
FF:10153-102I9 76 years, female 30.7
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.3
Pig sample Sample description nTPM
Subiculum
nTPM: 13.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.4
Sample A Female 12.4
Sample B Female 14.4
Sample C Male 12.6
Sample D Male 13.0
Dorsal hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 28.3
Min nTPM: 10.8
Sample A Female 21.1
Sample B Female 16.9
Sample C Male 28.3
Sample D Male 10.8
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 23.6
Min nTPM: 15.5
Sample A Female 15.5
Sample B Female 23.6
Sample C Male 16.5
Sample D Male 19.7
Ventral hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 19.3
Min nTPM: 12.6
Sample A Female 15.3
Sample B Female 12.6
Sample C Male 13.4
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 11.7
Min nTPM: 3.8
Sample A Male 11.7
Sample B Male 7.8
Sample C Female 6.3
Sample D Female 3.8
Hippocampal formation
nTPM: 12.2
Samples: 4

Max nTPM: 15.7
Min nTPM: 9.7
Sample A Male 9.7
Sample B Male 11.8
Sample C Female 15.7
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69782939 Antisense, RP_050505_04_A10, Mouse strain C57BL/6J (56 days, male) 0.0

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