HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:69.7 nTPM
HPA Brain:105.5 nTPM
GTEx:69.7 nTPM
FANTOM5:62.0 Scaled Tags Per Million
Pig:74.2 nTPM
Mouse:122.6 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011993Antibody HPA011994
Glial cells LowMedium
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.5
Sample id Sample description nTPM
Hippocampus
nTPM: 84.9
2621 Female, age 67, right hemisphere 93.1
2529 Female, age 94, left hemisphere 87.5
1911 Female, age 85, right hemisphere 86.3
1898 Male, age 80, left hemisphere 83.7
1855 Male, age 76, left hemisphere 81.0
2148 Female, age 91, left hemisphere 77.7
Dentate gyrus
nTPM: 71.2
2530 Female, age 94, left hemisphere 92.0
2246 Female, age 85, both hemispheres 72.6
1927 Female, age 91, both hemispheres 72.5
2010 Male, age 76, both hemispheres 70.1
2531 Female, age 67, both hemispheres 60.5
2528 Male, age 74, both hemispheres 59.6
Entorhinal gyrus
nTPM: 105.5
2613 Female, age 94, left hemisphere 123.6
2686 Male, age 75, right hemisphere 119.6
1938 Female, age 85, left hemisphere 111.3
2117 Female, age 91, right hemisphere 99.0
1787 Male, age 76, left hemisphere 91.1
2764 Male, age 80, right hemisphere 88.4
Hippocampus, CA1
nTPM: 76.9
2749 Male, age 80, left hemisphere 105.0
1873 Female, age 85, both hemispheres 89.5
2527 Male, age 74, both hemispheres 84.1
2082 Female, age 91, right hemisphere 59.3
2045 Male, age 76, both hemispheres 46.5
Hippocampus, CA2
nTPM: 90.7
1963 Male, age 80, left hemisphere 135.9
2437 Female, age 94, left hemisphere 97.3
1892 Male, age 76, both hemispheres 90.4
1940 Female, age 85, left hemisphere 87.7
2113 Female, age 91, right hemisphere 69.1
2249 Male, age 74, both hemispheres 63.9
Hippocampus, CA3
nTPM: 74.6
2137 Male, age 80, left hemisphere 95.5
2861 Female, age 67, both hemispheres 92.8
1867 Male, age 76, both hemispheres 77.3
1891 Female, age 85, both hemispheres 71.1
2436 Male, age 74, both hemispheres 56.3
2620 Female, age 94, left hemisphere 54.9
Parahippocampal cortex
nTPM: 99.1
2622 Female, age 67, right hemisphere 143.8
2692 Male, age 74, both hemispheres 118.6
1933 Female, age 85, both hemispheres 106.0
1850 Male, age 80, both hemispheres 103.7
2532 Female, age 72, left hemisphere 100.1
1990 Female, age 91, right hemisphere 93.9
2245 Female, age 91, both hemispheres 93.5
2693 Female, age 94, both hemispheres 83.8
2250 Female, age 67, right hemisphere 80.8
2018 Male, age 76, both hemispheres 66.9
Perirhinal gyrus
nTPM: 88.5
1841 Female, age 85, right hemisphere 107.7
1794 Male, age 80, right hemisphere 106.5
1847 Female, age 91, left hemisphere 90.3
2521 Female, age 94, right hemisphere 71.4
2848 Male, age 76, right hemisphere 66.7
Subiculum
nTPM: 80.4
2619 Male, age 74, both hemispheres 102.1
2438 Female, age 94, left hemisphere 92.2
1977 Female, age 85, both hemispheres 82.4
2042 Male, age 76, both hemispheres 70.7
1901 Male, age 80, both hemispheres 69.5
2729 Female, age 91, right hemisphere 65.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.7
Samples: 197

Max nTPM: 169.8
Min nTPM: 23.2
Std nTPM: 26.2
Median nTPM: 65.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 169.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 166.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 140.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 138.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 131.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 127.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 126.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 122.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 122.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 121.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 121.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.0
FF:10153-102I9 76 years, female 79.4
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.2
Pig sample Sample description nTPM
Subiculum
nTPM: 70.8
Samples: 4

Max nTPM: 82.4
Min nTPM: 57.7
Sample A Female 82.4
Sample B Female 76.0
Sample C Male 67.2
Sample D Male 57.7
Dorsal hippocampus
nTPM: 63.9
Samples: 4

Max nTPM: 74.7
Min nTPM: 52.2
Sample A Female 74.7
Sample B Female 68.0
Sample C Male 60.6
Sample D Male 52.2
Entorhinal cortex
nTPM: 74.3
Samples: 4

Max nTPM: 83.4
Min nTPM: 57.5
Sample A Female 75.3
Sample B Female 83.4
Sample C Male 80.8
Sample D Male 57.5
Ventral hippocampus
nTPM: 66.2
Samples: 4

Max nTPM: 89.2
Min nTPM: 55.8
Sample A Female 60.5
Sample B Female 59.4
Sample C Male 89.2
Sample D Male 55.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 122.6
Samples: 4

Max nTPM: 135.1
Min nTPM: 105.2
Sample A Male 135.1
Sample B Male 132.3
Sample C Female 117.8
Sample D Female 105.2
Hippocampal formation
nTPM: 113.9
Samples: 4

Max nTPM: 121.1
Min nTPM: 106.3
Sample A Male 121.1
Sample B Male 106.3
Sample C Female 120.6
Sample D Female 107.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69015242 Antisense, RP_050310_02_E11, Mouse strain C57BL/6J (56 days, male) 9.0
72129243 Antisense, RP_051017_03_E03, Mouse strain C57BL/6J (56 days, male) 4.7

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