HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:46.2 nTPM
HPA Brain:87.3 nTPM
GTEx:46.2 nTPM
FANTOM5:152.0 Scaled Tags Per Million
Pig:96.0 nTPM
Mouse:169.8 nTPM
Allen mouse:10.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014837
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.3
Sample id Sample description nTPM
Hippocampus
nTPM: 81.5
1898 Male, age 80, left hemisphere 97.3
2529 Female, age 94, left hemisphere 84.7
2148 Female, age 91, left hemisphere 82.5
1911 Female, age 85, right hemisphere 77.1
1855 Male, age 76, left hemisphere 76.6
2621 Female, age 67, right hemisphere 71.2
Dentate gyrus
nTPM: 78.1
2528 Male, age 74, both hemispheres 89.1
1927 Female, age 91, both hemispheres 88.6
2246 Female, age 85, both hemispheres 86.1
2010 Male, age 76, both hemispheres 78.4
2530 Female, age 94, left hemisphere 66.1
2531 Female, age 67, both hemispheres 60.0
Entorhinal gyrus
nTPM: 71.8
2117 Female, age 91, right hemisphere 91.9
1938 Female, age 85, left hemisphere 83.3
2764 Male, age 80, right hemisphere 75.6
1787 Male, age 76, left hemisphere 70.9
2613 Female, age 94, left hemisphere 55.8
2686 Male, age 75, right hemisphere 53.2
Hippocampus, CA1
nTPM: 87.3
2749 Male, age 80, left hemisphere 99.0
1873 Female, age 85, both hemispheres 94.3
2527 Male, age 74, both hemispheres 91.7
2045 Male, age 76, both hemispheres 80.7
2082 Female, age 91, right hemisphere 70.9
Hippocampus, CA2
nTPM: 80.6
2249 Male, age 74, both hemispheres 91.9
1892 Male, age 76, both hemispheres 90.5
1963 Male, age 80, left hemisphere 87.9
1940 Female, age 85, left hemisphere 74.4
2113 Female, age 91, right hemisphere 73.1
2437 Female, age 94, left hemisphere 65.5
Hippocampus, CA3
nTPM: 83.8
2436 Male, age 74, both hemispheres 102.0
2620 Female, age 94, left hemisphere 97.0
1891 Female, age 85, both hemispheres 85.0
1867 Male, age 76, both hemispheres 80.7
2137 Male, age 80, left hemisphere 79.2
2861 Female, age 67, both hemispheres 58.8
Parahippocampal cortex
nTPM: 75.2
1850 Male, age 80, both hemispheres 88.9
2250 Female, age 67, right hemisphere 88.1
1933 Female, age 85, both hemispheres 86.0
1990 Female, age 91, right hemisphere 76.8
2245 Female, age 91, both hemispheres 76.4
2693 Female, age 94, both hemispheres 70.0
2532 Female, age 72, left hemisphere 69.8
2692 Male, age 74, both hemispheres 67.0
2018 Male, age 76, both hemispheres 65.0
2622 Female, age 67, right hemisphere 64.4
Perirhinal gyrus
nTPM: 84.4
1794 Male, age 80, right hemisphere 89.9
1847 Female, age 91, left hemisphere 88.1
1841 Female, age 85, right hemisphere 86.5
2521 Female, age 94, right hemisphere 82.4
2848 Male, age 76, right hemisphere 75.2
Subiculum
nTPM: 75.3
2729 Female, age 91, right hemisphere 83.0
1977 Female, age 85, both hemispheres 81.4
2619 Male, age 74, both hemispheres 81.0
2438 Female, age 94, left hemisphere 73.4
1901 Male, age 80, both hemispheres 71.7
2042 Male, age 76, both hemispheres 61.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.2
Samples: 197

Max nTPM: 83.2
Min nTPM: 18.6
Std nTPM: 11.9
Median nTPM: 45.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 83.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 76.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 76.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 72.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 69.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 69.1
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 67.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 66.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 64.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 64.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 64.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.0
FF:10169-103B7 60 years, female 196.2
FF:10153-102I9 76 years, female 107.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.0
Pig sample Sample description nTPM
Subiculum
nTPM: 95.7
Samples: 4

Max nTPM: 105.0
Min nTPM: 87.6
Sample A Female 105.0
Sample B Female 101.6
Sample C Male 88.5
Sample D Male 87.6
Dorsal hippocampus
nTPM: 95.1
Samples: 4

Max nTPM: 107.9
Min nTPM: 84.1
Sample A Female 107.9
Sample B Female 102.6
Sample C Male 85.6
Sample D Male 84.1
Entorhinal cortex
nTPM: 80.9
Samples: 4

Max nTPM: 93.4
Min nTPM: 67.7
Sample A Female 79.1
Sample B Female 93.4
Sample C Male 83.2
Sample D Male 67.7
Ventral hippocampus
nTPM: 95.9
Samples: 4

Max nTPM: 106.4
Min nTPM: 84.6
Sample A Female 106.4
Sample B Female 84.6
Sample C Male 103.8
Sample D Male 88.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 169.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.8
Samples: 4

Max nTPM: 187.0
Min nTPM: 155.6
Sample A Male 155.6
Sample B Male 161.8
Sample C Female 174.8
Sample D Female 187.0
Hippocampal formation
nTPM: 166.6
Samples: 4

Max nTPM: 175.7
Min nTPM: 157.7
Sample A Male 175.7
Sample B Male 157.7
Sample C Female 168.9
Sample D Female 164.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.5
67765732 Antisense, RP_040916_01_G05, Mouse strain C57BL/6J (56 days, male) 10.5

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