HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:2.4 nTPM
HPA Brain:35.4 nTPM
GTEx:2.4 nTPM
FANTOM5:24.1 Scaled Tags Per Million
Pig:9.3 nTPM
Mouse:4.8 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007859
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.4
Sample id Sample description nTPM
Hippocampus
nTPM: 34.2
2621 Female, age 67, right hemisphere 42.2
2148 Female, age 91, left hemisphere 40.2
2529 Female, age 94, left hemisphere 34.8
1855 Male, age 76, left hemisphere 33.0
1898 Male, age 80, left hemisphere 30.4
1911 Female, age 85, right hemisphere 24.7
Dentate gyrus
nTPM: 35.4
2531 Female, age 67, both hemispheres 43.3
2530 Female, age 94, left hemisphere 38.0
2246 Female, age 85, both hemispheres 36.6
2528 Male, age 74, both hemispheres 35.4
2010 Male, age 76, both hemispheres 32.7
1927 Female, age 91, both hemispheres 26.3
Entorhinal gyrus
nTPM: 21.2
2117 Female, age 91, right hemisphere 31.3
2686 Male, age 75, right hemisphere 22.3
1787 Male, age 76, left hemisphere 21.0
1938 Female, age 85, left hemisphere 18.1
2764 Male, age 80, right hemisphere 17.3
2613 Female, age 94, left hemisphere 17.1
Hippocampus, CA1
nTPM: 31.7
2045 Male, age 76, both hemispheres 44.3
2527 Male, age 74, both hemispheres 37.7
1873 Female, age 85, both hemispheres 33.2
2082 Female, age 91, right hemisphere 24.4
2749 Male, age 80, left hemisphere 19.0
Hippocampus, CA2
nTPM: 24.0
2437 Female, age 94, left hemisphere 30.2
2249 Male, age 74, both hemispheres 27.9
2113 Female, age 91, right hemisphere 26.0
1940 Female, age 85, left hemisphere 21.7
1892 Male, age 76, both hemispheres 20.9
1963 Male, age 80, left hemisphere 17.5
Hippocampus, CA3
nTPM: 35.1
2861 Female, age 67, both hemispheres 59.6
2436 Male, age 74, both hemispheres 40.5
2620 Female, age 94, left hemisphere 30.1
1867 Male, age 76, both hemispheres 28.9
1891 Female, age 85, both hemispheres 26.2
2137 Male, age 80, left hemisphere 25.3
Parahippocampal cortex
nTPM: 25.7
2018 Male, age 76, both hemispheres 38.6
2245 Female, age 91, both hemispheres 34.4
2622 Female, age 67, right hemisphere 29.5
2532 Female, age 72, left hemisphere 27.2
2250 Female, age 67, right hemisphere 25.3
2693 Female, age 94, both hemispheres 23.9
2692 Male, age 74, both hemispheres 22.1
1850 Male, age 80, both hemispheres 21.7
1933 Female, age 85, both hemispheres 20.5
1990 Female, age 91, right hemisphere 14.1
Perirhinal gyrus
nTPM: 22.1
1841 Female, age 85, right hemisphere 27.5
2848 Male, age 76, right hemisphere 23.7
1794 Male, age 80, right hemisphere 20.7
2521 Female, age 94, right hemisphere 19.6
1847 Female, age 91, left hemisphere 19.0
Subiculum
nTPM: 28.3
2438 Female, age 94, left hemisphere 40.0
2042 Male, age 76, both hemispheres 34.4
2619 Male, age 74, both hemispheres 27.2
2729 Female, age 91, right hemisphere 26.4
1977 Female, age 85, both hemispheres 24.7
1901 Male, age 80, both hemispheres 17.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.4
Samples: 197

Max nTPM: 8.4
Min nTPM: 1.1
Std nTPM: 1.0
Median nTPM: 2.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 8.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 6.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 6.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 6.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 5.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 4.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 4.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 4.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 4.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 4.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 4.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.1
FF:10153-102I9 76 years, female 28.5
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.3
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.2
Sample A Female 8.8
Sample B Female 8.2
Sample C Male 8.9
Sample D Male 10.3
Dorsal hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.7
Sample A Female 8.2
Sample B Female 7.7
Sample C Male 8.7
Sample D Male 9.1
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.1
Sample A Female 9.3
Sample B Female 7.0
Sample C Male 8.6
Sample D Male 6.1
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 12.5
Min nTPM: 7.2
Sample A Female 8.9
Sample B Female 8.7
Sample C Male 12.5
Sample D Male 7.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.6
Sample A Male 3.6
Sample B Male 3.7
Sample C Female 5.4
Sample D Female 5.6
Hippocampal formation
nTPM: 4.8
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.6
Sample A Male 3.6
Sample B Male 5.4
Sample C Female 5.5
Sample D Female 4.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70723613 Antisense, RP_050705_01_D12, Mouse strain C57BL/6J (56 days, male) 0.4
74988759 Antisense, RP_060315_05_H03, Mouse strain C57BL/6J (56 days, male) 0.4

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