HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.8 nTPM
HPA Brain:7.0 nTPM
GTEx:10.8 nTPM
FANTOM5:34.1 Scaled Tags Per Million
Pig:48.5 nTPM
Mouse:28.9 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036182Antibody HPA057980
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.0
Sample id Sample description nTPM
Hippocampus
nTPM: 6.8
2148 Female, age 91, left hemisphere 9.2
2621 Female, age 67, right hemisphere 9.2
1898 Male, age 80, left hemisphere 6.9
1855 Male, age 76, left hemisphere 6.1
2529 Female, age 94, left hemisphere 5.7
1911 Female, age 85, right hemisphere 3.9
Dentate gyrus
nTPM: 6.1
2530 Female, age 94, left hemisphere 9.3
1927 Female, age 91, both hemispheres 6.8
2246 Female, age 85, both hemispheres 6.7
2531 Female, age 67, both hemispheres 5.7
2010 Male, age 76, both hemispheres 5.1
2528 Male, age 74, both hemispheres 2.6
Entorhinal gyrus
nTPM: 6.5
2686 Male, age 75, right hemisphere 8.1
2613 Female, age 94, left hemisphere 7.1
2764 Male, age 80, right hemisphere 6.7
1787 Male, age 76, left hemisphere 6.0
1938 Female, age 85, left hemisphere 5.8
2117 Female, age 91, right hemisphere 5.3
Hippocampus, CA1
nTPM: 6.4
1873 Female, age 85, both hemispheres 9.4
2749 Male, age 80, left hemisphere 7.4
2527 Male, age 74, both hemispheres 5.4
2082 Female, age 91, right hemisphere 5.1
2045 Male, age 76, both hemispheres 4.5
Hippocampus, CA2
nTPM: 5.7
1963 Male, age 80, left hemisphere 8.5
1892 Male, age 76, both hemispheres 7.6
1940 Female, age 85, left hemisphere 5.5
2249 Male, age 74, both hemispheres 4.5
2437 Female, age 94, left hemisphere 4.5
2113 Female, age 91, right hemisphere 3.5
Hippocampus, CA3
nTPM: 6.9
2436 Male, age 74, both hemispheres 8.3
2861 Female, age 67, both hemispheres 7.8
2137 Male, age 80, left hemisphere 7.1
1867 Male, age 76, both hemispheres 6.4
2620 Female, age 94, left hemisphere 6.3
1891 Female, age 85, both hemispheres 5.7
Parahippocampal cortex
nTPM: 5.9
1850 Male, age 80, both hemispheres 7.9
1990 Female, age 91, right hemisphere 7.1
2693 Female, age 94, both hemispheres 7.0
2018 Male, age 76, both hemispheres 6.8
2245 Female, age 91, both hemispheres 6.2
2250 Female, age 67, right hemisphere 6.0
2622 Female, age 67, right hemisphere 5.9
2692 Male, age 74, both hemispheres 5.7
1933 Female, age 85, both hemispheres 4.1
2532 Female, age 72, left hemisphere 2.5
Perirhinal gyrus
nTPM: 7.0
1847 Female, age 91, left hemisphere 9.2
2521 Female, age 94, right hemisphere 8.3
1841 Female, age 85, right hemisphere 6.9
1794 Male, age 80, right hemisphere 6.5
2848 Male, age 76, right hemisphere 4.1
Subiculum
nTPM: 6.1
1901 Male, age 80, both hemispheres 8.3
1977 Female, age 85, both hemispheres 7.0
2438 Female, age 94, left hemisphere 6.7
2619 Male, age 74, both hemispheres 5.5
2729 Female, age 91, right hemisphere 5.0
2042 Male, age 76, both hemispheres 4.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 27.1
Min nTPM: 0.8
Std nTPM: 3.8
Median nTPM: 10.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 21.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 19.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 19.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 19.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 18.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 18.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 17.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.1
FF:10169-103B7 60 years, female 44.6
FF:10153-102I9 76 years, female 23.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.5
Pig sample Sample description nTPM
Subiculum
nTPM: 42.4
Samples: 4

Max nTPM: 44.5
Min nTPM: 41.5
Sample A Female 44.5
Sample B Female 41.5
Sample C Male 41.8
Sample D Male 41.8
Dorsal hippocampus
nTPM: 48.5
Samples: 4

Max nTPM: 53.0
Min nTPM: 41.2
Sample A Female 53.0
Sample B Female 49.4
Sample C Male 50.5
Sample D Male 41.2
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 45.4
Min nTPM: 42.1
Sample A Female 42.1
Sample B Female 44.2
Sample C Male 45.4
Sample D Male 42.8
Ventral hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 48.4
Min nTPM: 43.2
Sample A Female 43.4
Sample B Female 43.2
Sample C Male 43.7
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.8
Sample A Male 27.6
Sample B Male 28.6
Sample C Female 32.6
Sample D Female 26.8
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 29.8
Min nTPM: 27.3
Sample A Male 29.8
Sample B Male 27.7
Sample C Female 27.8
Sample D Female 27.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
68667539 Antisense, RP_050201_02_E02, Mouse strain C57BL/6J (56 days, male) 3.9

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