HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.5 nTPM
HPA Brain:17.2 nTPM
GTEx:25.5 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:57.4 nTPM
Mouse:16.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003751
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
1855 Male, age 76, left hemisphere 21.6
1898 Male, age 80, left hemisphere 18.7
2529 Female, age 94, left hemisphere 16.5
2621 Female, age 67, right hemisphere 14.6
1911 Female, age 85, right hemisphere 12.4
2148 Female, age 91, left hemisphere 10.5
Dentate gyrus
nTPM: 15.5
1927 Female, age 91, both hemispheres 18.6
2010 Male, age 76, both hemispheres 18.1
2528 Male, age 74, both hemispheres 18.1
2246 Female, age 85, both hemispheres 15.2
2531 Female, age 67, both hemispheres 12.3
2530 Female, age 94, left hemisphere 10.5
Entorhinal gyrus
nTPM: 15.6
1938 Female, age 85, left hemisphere 25.7
2686 Male, age 75, right hemisphere 17.8
2764 Male, age 80, right hemisphere 14.5
1787 Male, age 76, left hemisphere 14.2
2117 Female, age 91, right hemisphere 12.7
2613 Female, age 94, left hemisphere 8.7
Hippocampus, CA1
nTPM: 14.5
1873 Female, age 85, both hemispheres 17.0
2749 Male, age 80, left hemisphere 15.7
2527 Male, age 74, both hemispheres 14.1
2045 Male, age 76, both hemispheres 12.8
2082 Female, age 91, right hemisphere 12.8
Hippocampus, CA2
nTPM: 16.3
1892 Male, age 76, both hemispheres 23.6
2249 Male, age 74, both hemispheres 20.5
1940 Female, age 85, left hemisphere 15.2
2113 Female, age 91, right hemisphere 14.7
1963 Male, age 80, left hemisphere 13.0
2437 Female, age 94, left hemisphere 10.6
Hippocampus, CA3
nTPM: 15.9
2436 Male, age 74, both hemispheres 23.6
2137 Male, age 80, left hemisphere 19.3
2861 Female, age 67, both hemispheres 18.0
1867 Male, age 76, both hemispheres 14.0
1891 Female, age 85, both hemispheres 10.9
2620 Female, age 94, left hemisphere 9.6
Parahippocampal cortex
nTPM: 14.9
1850 Male, age 80, both hemispheres 22.5
1933 Female, age 85, both hemispheres 17.6
2622 Female, age 67, right hemisphere 16.7
2692 Male, age 74, both hemispheres 15.3
2532 Female, age 72, left hemisphere 15.2
2018 Male, age 76, both hemispheres 14.9
2245 Female, age 91, both hemispheres 13.2
2250 Female, age 67, right hemisphere 12.0
2693 Female, age 94, both hemispheres 11.0
1990 Female, age 91, right hemisphere 10.8
Perirhinal gyrus
nTPM: 16.1
1847 Female, age 91, left hemisphere 19.5
1794 Male, age 80, right hemisphere 17.8
2848 Male, age 76, right hemisphere 15.2
2521 Female, age 94, right hemisphere 14.5
1841 Female, age 85, right hemisphere 13.7
Subiculum
nTPM: 17.2
1977 Female, age 85, both hemispheres 21.1
2729 Female, age 91, right hemisphere 18.5
2619 Male, age 74, both hemispheres 16.6
2042 Male, age 76, both hemispheres 16.4
1901 Male, age 80, both hemispheres 15.8
2438 Female, age 94, left hemisphere 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.5
Samples: 197

Max nTPM: 50.0
Min nTPM: 13.1
Std nTPM: 4.3
Median nTPM: 25.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 50.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 36.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 35.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 34.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 34.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 33.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 33.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 32.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 32.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 32.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 32.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.1
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.4
Pig sample Sample description nTPM
Subiculum
nTPM: 47.5
Samples: 4

Max nTPM: 49.8
Min nTPM: 45.9
Sample A Female 45.9
Sample B Female 48.4
Sample C Male 49.8
Sample D Male 46.0
Dorsal hippocampus
nTPM: 45.8
Samples: 4

Max nTPM: 50.3
Min nTPM: 38.4
Sample A Female 38.4
Sample B Female 48.7
Sample C Male 45.9
Sample D Male 50.3
Entorhinal cortex
nTPM: 57.4
Samples: 4

Max nTPM: 63.3
Min nTPM: 54.8
Sample A Female 55.8
Sample B Female 63.3
Sample C Male 54.8
Sample D Male 55.6
Ventral hippocampus
nTPM: 48.0
Samples: 4

Max nTPM: 52.6
Min nTPM: 44.7
Sample A Female 44.7
Sample B Female 52.6
Sample C Male 44.8
Sample D Male 49.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 17.1
Min nTPM: 16.4
Sample A Male 17.0
Sample B Male 17.1
Sample C Female 16.7
Sample D Female 16.4
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.7
Sample A Male 16.0
Sample B Male 17.1
Sample C Female 15.5
Sample D Female 13.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69134634 Antisense, RP_050321_03_C01, Mouse strain C57BL/6J (56 days, male) 0.1

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