HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:32.5 nTPM
HPA Brain:32.8 nTPM
GTEx:32.5 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:18.4 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008848Antibody CAB002147
Glial cells MediumNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 23.9
2529 Female, age 94, left hemisphere 35.4
1898 Male, age 80, left hemisphere 23.7
1911 Female, age 85, right hemisphere 23.2
2621 Female, age 67, right hemisphere 23.2
2148 Female, age 91, left hemisphere 21.6
1855 Male, age 76, left hemisphere 16.0
Dentate gyrus
nTPM: 23.9
2530 Female, age 94, left hemisphere 34.1
2010 Male, age 76, both hemispheres 26.5
2528 Male, age 74, both hemispheres 25.2
2531 Female, age 67, both hemispheres 21.2
2246 Female, age 85, both hemispheres 20.4
1927 Female, age 91, both hemispheres 16.2
Entorhinal gyrus
nTPM: 30.0
2117 Female, age 91, right hemisphere 63.1
2764 Male, age 80, right hemisphere 35.3
2686 Male, age 75, right hemisphere 21.4
1938 Female, age 85, left hemisphere 21.1
2613 Female, age 94, left hemisphere 20.3
1787 Male, age 76, left hemisphere 18.7
Hippocampus, CA1
nTPM: 18.4
2527 Male, age 74, both hemispheres 28.6
2082 Female, age 91, right hemisphere 19.9
1873 Female, age 85, both hemispheres 16.2
2749 Male, age 80, left hemisphere 16.1
2045 Male, age 76, both hemispheres 11.5
Hippocampus, CA2
nTPM: 25.6
1963 Male, age 80, left hemisphere 34.4
2437 Female, age 94, left hemisphere 30.1
2249 Male, age 74, both hemispheres 27.5
1940 Female, age 85, left hemisphere 24.7
2113 Female, age 91, right hemisphere 22.8
1892 Male, age 76, both hemispheres 14.3
Hippocampus, CA3
nTPM: 20.3
1891 Female, age 85, both hemispheres 32.7
1867 Male, age 76, both hemispheres 23.7
2861 Female, age 67, both hemispheres 18.8
2436 Male, age 74, both hemispheres 16.5
2137 Male, age 80, left hemisphere 15.5
2620 Female, age 94, left hemisphere 14.6
Parahippocampal cortex
nTPM: 23.1
1990 Female, age 91, right hemisphere 33.9
2692 Male, age 74, both hemispheres 33.9
2532 Female, age 72, left hemisphere 26.9
2245 Female, age 91, both hemispheres 23.7
2018 Male, age 76, both hemispheres 21.7
1850 Male, age 80, both hemispheres 21.2
1933 Female, age 85, both hemispheres 20.9
2250 Female, age 67, right hemisphere 19.0
2693 Female, age 94, both hemispheres 15.5
2622 Female, age 67, right hemisphere 14.3
Perirhinal gyrus
nTPM: 17.5
2521 Female, age 94, right hemisphere 25.8
1794 Male, age 80, right hemisphere 17.9
1847 Female, age 91, left hemisphere 16.9
1841 Female, age 85, right hemisphere 14.8
2848 Male, age 76, right hemisphere 12.3
Subiculum
nTPM: 32.8
1901 Male, age 80, both hemispheres 38.4
2438 Female, age 94, left hemisphere 34.4
1977 Female, age 85, both hemispheres 33.5
2042 Male, age 76, both hemispheres 33.0
2619 Male, age 74, both hemispheres 30.8
2729 Female, age 91, right hemisphere 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.5
Samples: 197

Max nTPM: 168.7
Min nTPM: 8.3
Std nTPM: 18.7
Median nTPM: 29.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 168.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 112.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 87.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 87.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 83.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 75.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 73.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 70.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 66.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 59.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 16.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.0
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.8
Sample A Female 18.6
Sample B Female 17.8
Sample C Male 13.9
Sample D Male 13.8
Dorsal hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 44.1
Min nTPM: 13.3
Sample A Female 44.1
Sample B Female 24.1
Sample C Male 38.7
Sample D Male 13.3
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 22.1
Min nTPM: 14.3
Sample A Female 16.2
Sample B Female 22.1
Sample C Male 14.3
Sample D Male 16.2
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 25.5
Min nTPM: 15.8
Sample A Female 23.3
Sample B Female 15.8
Sample C Male 25.5
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 5.8
Sample A Male 14.2
Sample B Male 12.1
Sample C Female 9.3
Sample D Female 5.8
Hippocampal formation
nTPM: 18.4
Samples: 4

Max nTPM: 26.0
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 17.6
Sample C Female 26.0
Sample D Female 17.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
71836841 Antisense, RP_051017_02_C04, Mouse strain C57BL/6J (56 days, male) 2.8
68196927 Antisense, RP_041116_01_F06, Mouse strain C57BL/6J (56 days, male) 1.1

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