HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		33.701
RNA expressioni
Consensus:54.9 nTPM
HPA Brain:174.0 nTPM
GTEx:54.9 nTPM
FANTOM5:133.8 Scaled Tags Per Million
Pig:70.6 nTPM
Mouse:98.3 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001922
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA001922
Hippocampal formation mean intensity 33.701
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 17.402
Molecular layer of the dentate gyrus 9.930
Granular dentate gyrus 22.197
CA1 - oriens layer 11.297
CA1 - pyramidal layer 32.682
CA1 - radiatum layer 22.059
CA2 - oriens layer 18.071
CA2 - pyramidal layer 33.701
CA2 - radiatum layer 27.015
CA3 - oriens layer 12.786
CA3 - pyramidal layer 33.482
CA3 - radiatum layer 9.478
Stratum lucidum 17.086
Lacunosum moleculare 21.249
Subiculum -

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 174.0
Sample id Sample description nTPM
Hippocampus
nTPM: 84.9
2621 Female, age 67, right hemisphere 103.3
1898 Male, age 80, left hemisphere 98.0
1855 Male, age 76, left hemisphere 83.1
2148 Female, age 91, left hemisphere 79.1
1911 Female, age 85, right hemisphere 76.3
2529 Female, age 94, left hemisphere 69.8
Dentate gyrus
nTPM: 91.9
1927 Female, age 91, both hemispheres 121.9
2530 Female, age 94, left hemisphere 98.0
2246 Female, age 85, both hemispheres 93.7
2531 Female, age 67, both hemispheres 91.0
2010 Male, age 76, both hemispheres 79.7
2528 Male, age 74, both hemispheres 67.3
Entorhinal gyrus
nTPM: 174.0
2613 Female, age 94, left hemisphere 274.9
2686 Male, age 75, right hemisphere 210.6
2764 Male, age 80, right hemisphere 173.1
1938 Female, age 85, left hemisphere 158.1
1787 Male, age 76, left hemisphere 122.8
2117 Female, age 91, right hemisphere 104.3
Hippocampus, CA1
nTPM: 111.5
2749 Male, age 80, left hemisphere 149.9
2082 Female, age 91, right hemisphere 132.7
2527 Male, age 74, both hemispheres 105.9
2045 Male, age 76, both hemispheres 91.8
1873 Female, age 85, both hemispheres 77.1
Hippocampus, CA2
nTPM: 101.1
1892 Male, age 76, both hemispheres 129.6
2437 Female, age 94, left hemisphere 121.0
2113 Female, age 91, right hemisphere 92.5
1940 Female, age 85, left hemisphere 92.3
2249 Male, age 74, both hemispheres 88.8
1963 Male, age 80, left hemisphere 82.6
Hippocampus, CA3
nTPM: 106.2
2137 Male, age 80, left hemisphere 149.9
1867 Male, age 76, both hemispheres 124.9
2620 Female, age 94, left hemisphere 103.1
2861 Female, age 67, both hemispheres 100.5
2436 Male, age 74, both hemispheres 80.8
1891 Female, age 85, both hemispheres 77.9
Parahippocampal cortex
nTPM: 140.9
2622 Female, age 67, right hemisphere 184.3
2693 Female, age 94, both hemispheres 158.5
1850 Male, age 80, both hemispheres 156.7
2692 Male, age 74, both hemispheres 152.3
1990 Female, age 91, right hemisphere 150.2
2245 Female, age 91, both hemispheres 138.0
2532 Female, age 72, left hemisphere 127.2
2250 Female, age 67, right hemisphere 119.8
1933 Female, age 85, both hemispheres 119.2
2018 Male, age 76, both hemispheres 103.0
Perirhinal gyrus
nTPM: 151.4
1847 Female, age 91, left hemisphere 217.7
2521 Female, age 94, right hemisphere 174.9
1794 Male, age 80, right hemisphere 136.2
2848 Male, age 76, right hemisphere 123.1
1841 Female, age 85, right hemisphere 104.9
Subiculum
nTPM: 104.7
2438 Female, age 94, left hemisphere 139.5
1977 Female, age 85, both hemispheres 121.4
1901 Male, age 80, both hemispheres 118.9
2619 Male, age 74, both hemispheres 110.9
2042 Male, age 76, both hemispheres 78.9
2729 Female, age 91, right hemisphere 58.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.9
Samples: 197

Max nTPM: 140.8
Min nTPM: 4.4
Std nTPM: 24.1
Median nTPM: 52.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 140.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 127.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 112.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 105.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 101.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 101.3
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 99.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 97.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 96.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 95.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 92.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.8
FF:10153-102I9 76 years, female 154.5
FF:10169-103B7 60 years, female 113.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.6
Pig sample Sample description nTPM
Subiculum
nTPM: 70.7
Samples: 4

Max nTPM: 102.2
Min nTPM: 48.0
Sample A Female 102.2
Sample B Female 66.0
Sample C Male 66.4
Sample D Male 48.0
Dorsal hippocampus
nTPM: 57.3
Samples: 4

Max nTPM: 66.0
Min nTPM: 43.1
Sample A Female 66.0
Sample B Female 59.7
Sample C Male 60.4
Sample D Male 43.1
Entorhinal cortex
nTPM: 59.5
Samples: 4

Max nTPM: 63.6
Min nTPM: 55.1
Sample A Female 63.6
Sample B Female 55.1
Sample C Male 61.3
Sample D Male 58.1
Ventral hippocampus
nTPM: 53.3
Samples: 4

Max nTPM: 68.5
Min nTPM: 39.1
Sample A Female 44.0
Sample B Female 39.1
Sample C Male 61.5
Sample D Male 68.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.3
Samples: 4

Max nTPM: 102.1
Min nTPM: 94.3
Sample A Male 100.3
Sample B Male 102.1
Sample C Female 94.3
Sample D Female 96.4
Hippocampal formation
nTPM: 94.6
Samples: 4

Max nTPM: 106.5
Min nTPM: 87.0
Sample A Male 87.0
Sample B Male 90.1
Sample C Female 94.7
Sample D Female 106.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
68798974 Antisense, RP_050217_01_G02, Mouse strain C57BL/6J (56 days, male) 13.4

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