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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
166.9
nTPM
FANTOM5:
461.6
Scaled Tags Per Million
Pig:
70.9
nTPM
Allen mouse:
9.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
166.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 146.4
2188
Female, age 91, both hemispheres
173.1
2301
Female, age 85, both hemispheres
170.1
2090
Male, age 80, both hemispheres
139.9
1984
Male, age 76, both hemispheres
102.4
Dorsal cochlear nucleus nTPM: 125.0
2187
Female, age 91, both hemispheres
163.5
2378
Male, age 80, both hemispheres
134.6
2802
Male, age 74, right hemisphere
124.9
2058
Male, age 76, both hemispheres
106.5
2370
Male, age 61, both hemispheres
95.6
Dorsal tegmental nucleus nTPM: 131.7
2083
Male, age 80, both hemispheres
149.6
2358
Male, age 61, both hemispheres
143.0
2326
Male, age 74, both hemispheres
124.6
1936
Male, age 76, left hemisphere
109.5
Dorsolateral tegmental area nTPM: 130.3
2751
Female, age 85, both hemispheres
186.1
2654
Male, age 80, both hemispheres
150.6
2337
Male, age 61, both hemispheres
139.3
2360
Male, age 74, both hemispheres
92.2
2141
Male, age 76, both hemispheres
83.0
Kolliker-Fuse nucleus nTPM: 149.0
2793
Female, age 91, left hemisphere
195.9
2163
Male, age 80, both hemispheres
125.7
2315
Male, age 76, right hemisphere
125.6
Lateral lemniscal nuclei nTPM: 129.0
2453
Male, age 74, right hemisphere
152.3
2320
Female, age 91, left hemisphere
148.9
2169
Male, age 76, both hemispheres
119.7
2746
Female, age 85, left hemisphere
117.1
2036
Male, age 80, both hemispheres
106.9
Lateral parabrachial nucleus nTPM: 137.1
2792
Male, age 76, both hemispheres
203.2
2013
Male, age 80, both hemispheres
138.0
2139
Female, age 85, right hemisphere
116.5
2790
Male, age 61, both hemispheres
90.7
Lateral vestibular nucleus nTPM: 123.5
2311
Male, age 80, both hemispheres
138.8
2184
Male, age 76, both hemispheres
108.3
Locus coeruleus nTPM: 102.1
2720
Male, age 74, both hemispheres
121.3
2788
Male, age 74, unknown
110.4
2014
Male, age 55, unknown
107.4
2162
Male, age 80, both hemispheres
105.6
2123
Female, age 91, both hemispheres
95.7
2317
Female, age 72, unknown
91.7
1980
Male, age 76, both hemispheres
82.9
Medial parabrachial nucleus nTPM: 142.1
2170
Female, age 91, both hemispheres
186.5
2463
Female, age 85, right hemisphere
161.1
2854
Male, age 80, both hemispheres
152.8
2786
Male, age 76, both hemispheres
114.3
2156
Male, age 61, both hemispheres
95.8
Medial periolivary nuclei nTPM: 132.7
2458
Female, age 91, both hemispheres
160.5
2081
Male, age 80, both hemispheres
133.3
2791
Male, age 74, right hemisphere
132.8
2063
Male, age 76, both hemispheres
130.5
2171
Female, age 85, both hemispheres
106.3
Motor facial nucleus nTPM: 139.6
2365
Male, age 74, right hemisphere
174.0
2697
Female, age 85, both hemispheres
169.9
2795
Female, age 91, both hemispheres
144.3
2126
Male, age 61, both hemispheres
121.0
2327
Male, age 80, both hemispheres
114.6
2062
Male, age 76, both hemispheres
113.9
Motor trigeminal nucleus nTPM: 122.0
2321
Female, age 91, both hemispheres
139.8
2560
Male, age 74, both hemispheres
126.4
2079
Male, age 80, both hemispheres
121.0
2309
Male, age 76, both hemispheres
115.7
2335
Male, age 61, both hemispheres
107.3
Nuclei of the trapezoid body nTPM: 123.4
2368
Female, age 91, both hemispheres
145.4
2166
Male, age 80, both hemispheres
132.0
1983
Male, age 76, both hemispheres
126.2
2159
Male, age 61, both hemispheres
114.8
2735
Female, age 85, both hemispheres
98.7
Nucleus raphe magnus nTPM: 127.0
2459
Female, age 91, both hemispheres
149.3
2455
Male, age 74, both hemispheres
143.8
2051
Male, age 76, both hemispheres
138.2
2328
Male, age 80, both hemispheres
128.6
2160
Male, age 61, both hemispheres
106.3
2172
Female, age 85, both hemispheres
95.5
Paramedian reticular nucleus nTPM: 142.2
2052
Male, age 76, both hemispheres
166.0
2050
Female, age 85, both hemispheres
165.6
2057
Male, age 80, both hemispheres
128.7
2313
Male, age 61, both hemispheres
108.6
Pedunculopontine tegmental nucleus nTPM: 130.1
2338
Male, age 61, both hemispheres
152.0
2334
Male, age 80, both hemispheres
129.3
1921
Female, age 85, both hemispheres
109.0
Pontine nuclei nTPM: 129.2
2454
Male, age 74, left hemisphere
160.6
2319
Female, age 91, both hemispheres
152.4
2109
Female, age 72, unknown
140.3
1863
Male, age 55, unknown
136.1
1968
Male, age 76, left hemisphere
124.8
2115
Male, age 80, left hemisphere
114.2
2787
Female, age 85, both hemispheres
107.3
2727
Male, age 61, right hemisphere
97.5
Pontine raphe nucleus nTPM: 107.6
2122
Female, age 85, midline
110.3
2853
Male, age 76, midline
104.9
Posteroventral cochlear nucleus nTPM: 146.7
2341
Male, age 80, both hemispheres
188.2
2135
Female, age 91, both hemispheres
177.3
2070
Male, age 76, both hemispheres
140.9
2752
Female, age 85, both hemispheres
116.7
2371
Male, age 61, both hemispheres
110.2
Principal sensory trigeminal nucleus nTPM: 125.7
2367
Female, age 91, left hemisphere
180.1
2324
Male, age 76, both hemispheres
110.4
2158
Male, age 61, both hemispheres
106.8
2008
Male, age 80, left hemisphere
105.4
Reticular pontine nucleus, caudal nTPM: 151.8
2457
Female, age 91, both hemispheres
197.8
2559
Male, age 74, both hemispheres
148.2
2092
Male, age 76, both hemispheres
142.5
2332
Male, age 80, right hemisphere
118.6
Reticular pontine nucleus, oral nTPM: 166.9
2361
Male, age 74, both hemispheres
205.0
2366
Female, age 91, both hemispheres
202.2
1939
Male, age 80, both hemispheres
154.4
2167
Male, age 76, both hemispheres
137.1
2012
Female, age 85, both hemispheres
135.8
Reticulotegmental nucleus nTPM: 129.6
2322
Female, age 91, both hemispheres
163.1
2452
Male, age 74, both hemispheres
132.4
2333
Male, age 80, both hemispheres
124.6
2325
Male, age 76, both hemispheres
98.1
Spinal trigeminal nucleus, oral nTPM: 116.9
2164
Male, age 80, both hemispheres
137.1
1978
Male, age 76, both hemispheres
108.6
2737
Female, age 85, both hemispheres
105.1
Subcoeruleus area nTPM: 131.2
2369
Female, age 85, left hemisphere
214.2
1958
Male, age 80, both hemispheres
135.8
2089
Male, age 76, left hemisphere
109.2
2323
Female, age 91, left hemisphere
100.6
2451
Male, age 74, both hemispheres
96.3
Superior olive nTPM: 144.0
2020
Male, age 76, both hemispheres
164.0
2364
Male, age 74, right hemisphere
153.1
2561
Female, age 91, both hemispheres
143.9
1875
Female, age 85, both hemispheres
130.5
2329
Male, age 80, right hemisphere
128.6
Ventral periolivary nuclei nTPM: 131.3
2023
Male, age 76, both hemispheres
175.7
2165
Male, age 80, both hemispheres
128.9
2794
Female, age 91, left hemisphere
119.9
2130
Female, age 85, both hemispheres
100.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 137.1
2840
Female, age 85, both hemispheres
148.5
2359
Male, age 61, both hemispheres
139.7
2456
Female, age 91, both hemispheres
139.6
2449
Male, age 74, both hemispheres
134.3
1959
Male, age 76, both hemispheres
133.9
2161
Male, age 80, both hemispheres
126.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
70.9
Pig sample
Sample description
nTPM
Pons nTPM: 70.9
Samples: 4
Max nTPM: 77.9
Min nTPM: 59.3
Sample A
Female
69.5
Sample B
Female
59.3
Sample C
Male
77.0
Sample D
Male
77.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
