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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
154.4
nTPM
HPA Brain:
569.0
nTPM
GTEx:
154.4
nTPM
FANTOM5:
1587.6
Scaled Tags Per Million
Pig:
831.8
nTPM
Mouse:
639.3
nTPM
Allen mouse:
18.8
Expression energy
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA008273
Glial cells
Not detected
Neuronal cells
High
Neuronal projections
Medium
Synapses
Medium
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
154.4
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 154.4
Samples: 197
Max nTPM: 539.7
Min nTPM: 11.2
Std nTPM: 106.5
Median nTPM: 143.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
539.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
508.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
444.0
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
442.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
406.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
401.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
401.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
391.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
368.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
368.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
357.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
321.2
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
321.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
318.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
317.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
315.8
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
314.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
311.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
309.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
299.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
296.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
296.0
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
292.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
288.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
286.3
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
286.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
282.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
270.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
269.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
269.1
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
267.9
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
265.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
256.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
256.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
252.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
249.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
248.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
241.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
240.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
240.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
239.4
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
237.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
234.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
229.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
227.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
226.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
221.4
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
217.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
217.9
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
216.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
213.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
212.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
208.8
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
206.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
204.4
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
204.0
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
202.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
200.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
197.3
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
197.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
195.8
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
194.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
193.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
190.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
188.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
187.4
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
185.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
183.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
181.8
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
181.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
180.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
180.6
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
180.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
173.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
173.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
172.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
172.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
171.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
169.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
166.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
166.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
161.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
161.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
159.9
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
157.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
156.7
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
156.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
155.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
154.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
150.6
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
147.7
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
146.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
145.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
144.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
144.7
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
144.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
144.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
144.0
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
143.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
141.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
131.4
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
129.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
129.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
128.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
127.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
127.0
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
125.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
122.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
122.3
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
118.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
118.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
118.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
116.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
112.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
111.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
110.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
108.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
107.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
104.9
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
104.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
104.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
102.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
102.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
96.6
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
96.3
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
95.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
95.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
94.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
93.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
93.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
91.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
89.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
87.1
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
85.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
85.1
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
84.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
83.2
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
76.8
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
76.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
75.4
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
72.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
72.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
71.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
70.8
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
69.9
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
69.6
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
69.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
68.6
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
66.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
62.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
61.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
61.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
61.0
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
60.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
60.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
58.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
58.1
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
57.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
52.2
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
51.3
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
50.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
49.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
49.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
45.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
43.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
42.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
42.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
42.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
41.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
39.9
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
38.5
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
38.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
37.3
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
35.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
34.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
34.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
33.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
33.7
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
33.4
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
32.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
31.3
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
31.0
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
28.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
28.3
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
28.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
27.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
26.2
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
24.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
24.4
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
23.5
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
22.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
19.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
17.8
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
16.8
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
12.9
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
12.6
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
11.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
639.3
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 639.3
Samples: 4
Max nTPM: 693.7
Min nTPM: 581.3
Sample A
Male
633.2
Sample B
Male
581.3
Sample C
Female
648.9
Sample D
Female
693.7
Hippocampal formation nTPM: 501.4
Samples: 4
Max nTPM: 575.1
Min nTPM: 447.2
Sample A
Male
575.1
Sample B
Male
509.7
Sample C
Female
447.2
Sample D
Female
473.6
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.