HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:109.2 nTPM
HPA Brain:97.9 nTPM
GTEx:109.2 nTPM
FANTOM5:110.3 Scaled Tags Per Million
Pig:91.3 nTPM
Mouse:256.9 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026864
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.9
Sample id Sample description nTPM
Hippocampus
nTPM: 72.9
1898 Male, age 80, left hemisphere 112.9
2621 Female, age 67, right hemisphere 73.8
1855 Male, age 76, left hemisphere 70.0
2529 Female, age 94, left hemisphere 62.6
1911 Female, age 85, right hemisphere 59.1
2148 Female, age 91, left hemisphere 59.0
Dentate gyrus
nTPM: 75.5
1927 Female, age 91, both hemispheres 103.9
2010 Male, age 76, both hemispheres 88.5
2530 Female, age 94, left hemisphere 72.2
2246 Female, age 85, both hemispheres 69.1
2528 Male, age 74, both hemispheres 68.8
2531 Female, age 67, both hemispheres 50.3
Entorhinal gyrus
nTPM: 67.1
1938 Female, age 85, left hemisphere 88.9
2764 Male, age 80, right hemisphere 86.4
1787 Male, age 76, left hemisphere 70.7
2613 Female, age 94, left hemisphere 54.1
2117 Female, age 91, right hemisphere 52.6
2686 Male, age 75, right hemisphere 49.8
Hippocampus, CA1
nTPM: 83.5
2749 Male, age 80, left hemisphere 132.1
1873 Female, age 85, both hemispheres 94.6
2527 Male, age 74, both hemispheres 69.0
2082 Female, age 91, right hemisphere 62.7
2045 Male, age 76, both hemispheres 59.2
Hippocampus, CA2
nTPM: 82.4
1963 Male, age 80, left hemisphere 113.2
1892 Male, age 76, both hemispheres 111.1
2249 Male, age 74, both hemispheres 88.3
1940 Female, age 85, left hemisphere 66.0
2113 Female, age 91, right hemisphere 58.9
2437 Female, age 94, left hemisphere 56.9
Hippocampus, CA3
nTPM: 70.5
2137 Male, age 80, left hemisphere 91.4
2436 Male, age 74, both hemispheres 89.7
1867 Male, age 76, both hemispheres 80.6
1891 Female, age 85, both hemispheres 62.6
2620 Female, age 94, left hemisphere 55.4
2861 Female, age 67, both hemispheres 43.5
Parahippocampal cortex
nTPM: 73.0
1850 Male, age 80, both hemispheres 105.5
1990 Female, age 91, right hemisphere 87.7
1933 Female, age 85, both hemispheres 80.8
2245 Female, age 91, both hemispheres 77.5
2250 Female, age 67, right hemisphere 73.0
2693 Female, age 94, both hemispheres 70.5
2532 Female, age 72, left hemisphere 69.2
2018 Male, age 76, both hemispheres 65.0
2692 Male, age 74, both hemispheres 55.1
2622 Female, age 67, right hemisphere 46.0
Perirhinal gyrus
nTPM: 97.9
1847 Female, age 91, left hemisphere 133.7
1794 Male, age 80, right hemisphere 104.2
1841 Female, age 85, right hemisphere 95.7
2521 Female, age 94, right hemisphere 84.5
2848 Male, age 76, right hemisphere 71.6
Subiculum
nTPM: 61.3
1977 Female, age 85, both hemispheres 75.9
1901 Male, age 80, both hemispheres 72.8
2619 Male, age 74, both hemispheres 57.8
2729 Female, age 91, right hemisphere 56.4
2042 Male, age 76, both hemispheres 53.6
2438 Female, age 94, left hemisphere 51.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 109.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 109.2
Samples: 197

Max nTPM: 327.8
Min nTPM: 50.8
Std nTPM: 45.3
Median nTPM: 99.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 327.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 250.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 246.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 238.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 235.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 213.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 197.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 196.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 194.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 184.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.3
FF:10169-103B7 60 years, female 149.5
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.3
Pig sample Sample description nTPM
Subiculum
nTPM: 75.0
Samples: 4

Max nTPM: 94.3
Min nTPM: 63.8
Sample A Female 94.3
Sample B Female 70.6
Sample C Male 63.8
Sample D Male 71.4
Dorsal hippocampus
nTPM: 91.3
Samples: 4

Max nTPM: 118.5
Min nTPM: 71.4
Sample A Female 118.5
Sample B Female 93.3
Sample C Male 82.1
Sample D Male 71.4
Entorhinal cortex
nTPM: 77.2
Samples: 4

Max nTPM: 91.6
Min nTPM: 61.1
Sample A Female 79.1
Sample B Female 91.6
Sample C Male 77.1
Sample D Male 61.1
Ventral hippocampus
nTPM: 83.2
Samples: 4

Max nTPM: 105.6
Min nTPM: 62.9
Sample A Female 105.6
Sample B Female 62.9
Sample C Male 82.5
Sample D Male 81.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 256.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 238.6
Samples: 4

Max nTPM: 244.2
Min nTPM: 224.2
Sample A Male 224.2
Sample B Male 242.2
Sample C Female 244.2
Sample D Female 243.7
Hippocampal formation
nTPM: 256.9
Samples: 4

Max nTPM: 290.2
Min nTPM: 235.5
Sample A Male 290.2
Sample B Male 252.3
Sample C Female 249.7
Sample D Female 235.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
1550 Antisense, RP_040420_01_C03, Mouse strain C57BL/6J (56 days, male) 8.4
1549 Antisense, RP_040420_01_C03, Mouse strain C57BL/6J (56 days, male) 5.6

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