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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
140.1
nTPM
FANTOM5:
210.4
Scaled Tags Per Million
Pig:
143.3
nTPM
Allen mouse:
7.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
140.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 60.4
1984
Male, age 76, both hemispheres
67.3
2188
Female, age 91, both hemispheres
64.4
2090
Male, age 80, both hemispheres
59.7
2301
Female, age 85, both hemispheres
50.1
Dorsal cochlear nucleus nTPM: 62.1
2187
Female, age 91, both hemispheres
74.3
2058
Male, age 76, both hemispheres
68.4
2802
Male, age 74, right hemisphere
63.3
2370
Male, age 61, both hemispheres
57.1
2378
Male, age 80, both hemispheres
47.4
Dorsal tegmental nucleus nTPM: 68.3
2083
Male, age 80, both hemispheres
85.5
2326
Male, age 74, both hemispheres
74.8
1936
Male, age 76, left hemisphere
63.7
2358
Male, age 61, both hemispheres
49.1
Dorsolateral tegmental area nTPM: 78.5
2360
Male, age 74, both hemispheres
93.5
2654
Male, age 80, both hemispheres
88.6
2751
Female, age 85, both hemispheres
88.1
2141
Male, age 76, both hemispheres
77.8
2337
Male, age 61, both hemispheres
44.5
Kolliker-Fuse nucleus nTPM: 72.5
2163
Male, age 80, both hemispheres
104.2
2315
Male, age 76, right hemisphere
59.3
2793
Female, age 91, left hemisphere
54.1
Lateral lemniscal nuclei nTPM: 80.8
2169
Male, age 76, both hemispheres
107.8
2036
Male, age 80, both hemispheres
90.3
2746
Female, age 85, left hemisphere
86.8
2453
Male, age 74, right hemisphere
68.1
2320
Female, age 91, left hemisphere
51.1
Lateral parabrachial nucleus nTPM: 69.1
2139
Female, age 85, right hemisphere
101.9
2013
Male, age 80, both hemispheres
73.8
2790
Male, age 61, both hemispheres
50.8
2792
Male, age 76, both hemispheres
49.9
Lateral vestibular nucleus nTPM: 76.2
2184
Male, age 76, both hemispheres
88.9
2311
Male, age 80, both hemispheres
63.5
Locus coeruleus nTPM: 140.1
2014
Male, age 55, unknown
190.2
2123
Female, age 91, both hemispheres
175.0
2788
Male, age 74, unknown
163.8
2720
Male, age 74, both hemispheres
123.1
1980
Male, age 76, both hemispheres
121.7
2317
Female, age 72, unknown
113.8
2162
Male, age 80, both hemispheres
93.6
Medial parabrachial nucleus nTPM: 74.1
2170
Female, age 91, both hemispheres
86.8
2854
Male, age 80, both hemispheres
78.4
2786
Male, age 76, both hemispheres
71.0
2463
Female, age 85, right hemisphere
68.6
2156
Male, age 61, both hemispheres
65.5
Medial periolivary nuclei nTPM: 85.6
2171
Female, age 85, both hemispheres
117.3
2063
Male, age 76, both hemispheres
115.3
2791
Male, age 74, right hemisphere
87.4
2081
Male, age 80, both hemispheres
59.2
2458
Female, age 91, both hemispheres
48.7
Motor facial nucleus nTPM: 78.9
2062
Male, age 76, both hemispheres
125.2
2365
Male, age 74, right hemisphere
84.2
2126
Male, age 61, both hemispheres
76.2
2697
Female, age 85, both hemispheres
70.6
2327
Male, age 80, both hemispheres
62.5
2795
Female, age 91, both hemispheres
54.9
Motor trigeminal nucleus nTPM: 68.1
2309
Male, age 76, both hemispheres
82.9
2079
Male, age 80, both hemispheres
76.9
2560
Male, age 74, both hemispheres
66.0
2335
Male, age 61, both hemispheres
64.8
2321
Female, age 91, both hemispheres
50.0
Nuclei of the trapezoid body nTPM: 98.9
2159
Male, age 61, both hemispheres
139.6
2735
Female, age 85, both hemispheres
124.4
1983
Male, age 76, both hemispheres
111.4
2166
Male, age 80, both hemispheres
69.2
2368
Female, age 91, both hemispheres
49.8
Nucleus raphe magnus nTPM: 93.6
2160
Male, age 61, both hemispheres
168.5
2172
Female, age 85, both hemispheres
109.5
2455
Male, age 74, both hemispheres
88.1
2051
Male, age 76, both hemispheres
76.1
2328
Male, age 80, both hemispheres
65.7
2459
Female, age 91, both hemispheres
53.5
Paramedian reticular nucleus nTPM: 102.0
2050
Female, age 85, both hemispheres
117.7
2057
Male, age 80, both hemispheres
114.2
2313
Male, age 61, both hemispheres
104.3
2052
Male, age 76, both hemispheres
71.6
Pedunculopontine tegmental nucleus nTPM: 83.2
1921
Female, age 85, both hemispheres
93.2
2334
Male, age 80, both hemispheres
88.3
2338
Male, age 61, both hemispheres
68.2
Pontine nuclei nTPM: 101.9
2727
Male, age 61, right hemisphere
160.8
2787
Female, age 85, both hemispheres
120.3
1863
Male, age 55, unknown
114.5
2109
Female, age 72, unknown
110.4
1968
Male, age 76, left hemisphere
97.3
2454
Male, age 74, left hemisphere
90.1
2115
Male, age 80, left hemisphere
61.5
2319
Female, age 91, both hemispheres
60.5
Pontine raphe nucleus nTPM: 102.0
2122
Female, age 85, midline
114.6
2853
Male, age 76, midline
89.4
Posteroventral cochlear nucleus nTPM: 68.6
2752
Female, age 85, both hemispheres
104.4
2070
Male, age 76, both hemispheres
79.1
2135
Female, age 91, both hemispheres
54.6
2341
Male, age 80, both hemispheres
54.4
2371
Male, age 61, both hemispheres
50.4
Principal sensory trigeminal nucleus nTPM: 91.2
2158
Male, age 61, both hemispheres
135.7
2008
Male, age 80, left hemisphere
101.3
2324
Male, age 76, both hemispheres
73.9
2367
Female, age 91, left hemisphere
53.9
Reticular pontine nucleus, caudal nTPM: 72.8
2092
Male, age 76, both hemispheres
92.8
2559
Male, age 74, both hemispheres
76.0
2332
Male, age 80, right hemisphere
70.2
2457
Female, age 91, both hemispheres
52.3
Reticular pontine nucleus, oral nTPM: 89.2
2361
Male, age 74, both hemispheres
122.6
2012
Female, age 85, both hemispheres
101.8
1939
Male, age 80, both hemispheres
88.5
2167
Male, age 76, both hemispheres
77.9
2366
Female, age 91, both hemispheres
55.1
Reticulotegmental nucleus nTPM: 72.9
2325
Male, age 76, both hemispheres
98.7
2452
Male, age 74, both hemispheres
66.6
2333
Male, age 80, both hemispheres
63.4
2322
Female, age 91, both hemispheres
62.7
Spinal trigeminal nucleus, oral nTPM: 83.6
2737
Female, age 85, both hemispheres
99.2
2164
Male, age 80, both hemispheres
84.3
1978
Male, age 76, both hemispheres
67.3
Subcoeruleus area nTPM: 81.2
2323
Female, age 91, left hemisphere
93.7
1958
Male, age 80, both hemispheres
93.5
2089
Male, age 76, left hemisphere
76.0
2451
Male, age 74, both hemispheres
72.7
2369
Female, age 85, left hemisphere
70.0
Superior olive nTPM: 82.5
1875
Female, age 85, both hemispheres
117.3
2364
Male, age 74, right hemisphere
100.2
2020
Male, age 76, both hemispheres
82.1
2329
Male, age 80, right hemisphere
62.2
2561
Female, age 91, both hemispheres
50.5
Ventral periolivary nuclei nTPM: 83.6
2165
Male, age 80, both hemispheres
97.9
2130
Female, age 85, both hemispheres
96.7
2023
Male, age 76, both hemispheres
84.5
2794
Female, age 91, left hemisphere
55.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 72.4
2840
Female, age 85, both hemispheres
84.3
1959
Male, age 76, both hemispheres
84.0
2449
Male, age 74, both hemispheres
79.0
2359
Male, age 61, both hemispheres
73.0
2161
Male, age 80, both hemispheres
68.6
2456
Female, age 91, both hemispheres
45.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
143.3
Pig sample
Sample description
nTPM
Pons nTPM: 143.2
Samples: 4
Max nTPM: 164.2
Min nTPM: 125.6
Sample A
Female
127.8
Sample B
Female
125.6
Sample C
Male
164.2
Sample D
Male
155.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
