HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.8 nTPM
HPA Brain:94.0 nTPM
GTEx:22.8 nTPM
FANTOM5:38.0 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:12.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036089Antibody HPA036090Antibody CAB018774
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 94.0
Sample id Sample description nTPM
Hippocampus
nTPM: 88.1
2529 Female, age 94, left hemisphere 102.3
1855 Male, age 76, left hemisphere 99.8
1911 Female, age 85, right hemisphere 86.5
2148 Female, age 91, left hemisphere 82.9
1898 Male, age 80, left hemisphere 81.6
2621 Female, age 67, right hemisphere 75.6
Dentate gyrus
nTPM: 94.0
2530 Female, age 94, left hemisphere 138.5
2010 Male, age 76, both hemispheres 116.2
2528 Male, age 74, both hemispheres 94.3
2246 Female, age 85, both hemispheres 83.8
2531 Female, age 67, both hemispheres 77.8
1927 Female, age 91, both hemispheres 53.8
Entorhinal gyrus
nTPM: 71.6
2686 Male, age 75, right hemisphere 90.4
2117 Female, age 91, right hemisphere 75.5
1787 Male, age 76, left hemisphere 75.3
2764 Male, age 80, right hemisphere 73.1
2613 Female, age 94, left hemisphere 59.8
1938 Female, age 85, left hemisphere 55.6
Hippocampus, CA1
nTPM: 81.6
2527 Male, age 74, both hemispheres 96.4
2045 Male, age 76, both hemispheres 92.5
2082 Female, age 91, right hemisphere 78.9
1873 Female, age 85, both hemispheres 77.7
2749 Male, age 80, left hemisphere 62.6
Hippocampus, CA2
nTPM: 80.5
1963 Male, age 80, left hemisphere 93.9
2437 Female, age 94, left hemisphere 92.7
2249 Male, age 74, both hemispheres 90.4
2113 Female, age 91, right hemisphere 77.0
1940 Female, age 85, left hemisphere 75.8
1892 Male, age 76, both hemispheres 53.2
Hippocampus, CA3
nTPM: 78.6
2861 Female, age 67, both hemispheres 96.5
2436 Male, age 74, both hemispheres 86.2
1891 Female, age 85, both hemispheres 85.2
2137 Male, age 80, left hemisphere 73.9
2620 Female, age 94, left hemisphere 68.5
1867 Male, age 76, both hemispheres 61.5
Parahippocampal cortex
nTPM: 67.0
2018 Male, age 76, both hemispheres 118.0
2692 Male, age 74, both hemispheres 93.0
2622 Female, age 67, right hemisphere 75.6
2532 Female, age 72, left hemisphere 66.3
2245 Female, age 91, both hemispheres 63.6
1850 Male, age 80, both hemispheres 57.7
1990 Female, age 91, right hemisphere 56.3
1933 Female, age 85, both hemispheres 47.2
2250 Female, age 67, right hemisphere 46.8
2693 Female, age 94, both hemispheres 45.8
Perirhinal gyrus
nTPM: 46.5
2848 Male, age 76, right hemisphere 54.1
1794 Male, age 80, right hemisphere 50.6
2521 Female, age 94, right hemisphere 45.2
1847 Female, age 91, left hemisphere 41.7
1841 Female, age 85, right hemisphere 41.1
Subiculum
nTPM: 91.4
2042 Male, age 76, both hemispheres 129.6
2619 Male, age 74, both hemispheres 96.0
1901 Male, age 80, both hemispheres 89.7
2438 Female, age 94, left hemisphere 84.0
2729 Female, age 91, right hemisphere 81.4
1977 Female, age 85, both hemispheres 68.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.8
Samples: 197

Max nTPM: 48.8
Min nTPM: 4.3
Std nTPM: 8.5
Median nTPM: 21.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 48.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 47.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 46.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 43.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 42.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 41.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 41.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 41.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 40.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 40.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 39.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.0
FF:10153-102I9 76 years, female 61.6
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.3
Sample A Female 20.7
Sample B Female 16.3
Sample C Male 24.8
Sample D Male 26.7
Dorsal hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 27.8
Min nTPM: 13.3
Sample A Female 25.4
Sample B Female 19.9
Sample C Male 27.8
Sample D Male 13.3
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 14.8
Sample A Female 27.7
Sample B Female 20.2
Sample C Male 22.0
Sample D Male 14.8
Ventral hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 41.9
Min nTPM: 18.0
Sample A Female 22.6
Sample B Female 18.0
Sample C Male 41.9
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.8
Sample A Male 14.9
Sample B Male 11.2
Sample C Female 10.8
Sample D Female 11.5
Hippocampal formation
nTPM: 9.5
Samples: 4

Max nTPM: 10.8
Min nTPM: 8.7
Sample A Male 9.0
Sample B Male 9.4
Sample C Female 8.7
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71023014 Antisense, RP_050719_02_B05, Mouse strain C57BL/6J (56 days, male) 0.5
73512354 Antisense, RP_050719_02_B05, Mouse strain C57BL/6J (56 days, male) 0.2

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