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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
232.3
nTPM
FANTOM5:
212.6
Scaled Tags Per Million
Pig:
137.9
nTPM
Allen mouse:
0.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
232.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 224.9
2090
Male, age 80, both hemispheres
267.1
2188
Female, age 91, both hemispheres
253.3
2301
Female, age 85, both hemispheres
246.7
1984
Male, age 76, both hemispheres
132.6
Dorsal cochlear nucleus nTPM: 204.8
2378
Male, age 80, both hemispheres
237.3
2187
Female, age 91, both hemispheres
219.2
2802
Male, age 74, right hemisphere
193.5
2058
Male, age 76, both hemispheres
192.7
2370
Male, age 61, both hemispheres
181.6
Dorsal tegmental nucleus nTPM: 181.9
2083
Male, age 80, both hemispheres
186.6
2326
Male, age 74, both hemispheres
185.5
1936
Male, age 76, left hemisphere
179.0
2358
Male, age 61, both hemispheres
176.7
Dorsolateral tegmental area nTPM: 184.1
2337
Male, age 61, both hemispheres
221.3
2654
Male, age 80, both hemispheres
199.5
2751
Female, age 85, both hemispheres
180.1
2360
Male, age 74, both hemispheres
161.4
2141
Male, age 76, both hemispheres
158.1
Kolliker-Fuse nucleus nTPM: 197.6
2793
Female, age 91, left hemisphere
229.8
2315
Male, age 76, right hemisphere
194.9
2163
Male, age 80, both hemispheres
168.3
Lateral lemniscal nuclei nTPM: 153.9
2320
Female, age 91, left hemisphere
189.0
2746
Female, age 85, left hemisphere
186.2
2453
Male, age 74, right hemisphere
145.3
2169
Male, age 76, both hemispheres
133.2
2036
Male, age 80, both hemispheres
116.0
Lateral parabrachial nucleus nTPM: 203.5
2792
Male, age 76, both hemispheres
276.2
2013
Male, age 80, both hemispheres
209.1
2139
Female, age 85, right hemisphere
167.4
2790
Male, age 61, both hemispheres
161.3
Lateral vestibular nucleus nTPM: 197.8
2311
Male, age 80, both hemispheres
225.6
2184
Male, age 76, both hemispheres
170.0
Locus coeruleus nTPM: 138.6
2720
Male, age 74, both hemispheres
166.1
2162
Male, age 80, both hemispheres
153.3
2788
Male, age 74, unknown
151.1
2317
Female, age 72, unknown
136.3
1980
Male, age 76, both hemispheres
127.9
2123
Female, age 91, both hemispheres
127.9
2014
Male, age 55, unknown
107.6
Medial parabrachial nucleus nTPM: 180.0
2854
Male, age 80, both hemispheres
208.9
2786
Male, age 76, both hemispheres
200.9
2170
Female, age 91, both hemispheres
198.0
2156
Male, age 61, both hemispheres
152.9
2463
Female, age 85, right hemisphere
139.5
Medial periolivary nuclei nTPM: 169.5
2081
Male, age 80, both hemispheres
226.4
2458
Female, age 91, both hemispheres
205.9
2791
Male, age 74, right hemisphere
184.2
2063
Male, age 76, both hemispheres
123.7
2171
Female, age 85, both hemispheres
107.4
Motor facial nucleus nTPM: 166.6
2126
Male, age 61, both hemispheres
213.8
2697
Female, age 85, both hemispheres
206.7
2365
Male, age 74, right hemisphere
197.6
2795
Female, age 91, both hemispheres
155.7
2327
Male, age 80, both hemispheres
117.1
2062
Male, age 76, both hemispheres
109.0
Motor trigeminal nucleus nTPM: 177.8
2321
Female, age 91, both hemispheres
210.4
2309
Male, age 76, both hemispheres
190.7
2335
Male, age 61, both hemispheres
178.4
2560
Male, age 74, both hemispheres
165.0
2079
Male, age 80, both hemispheres
144.6
Nuclei of the trapezoid body nTPM: 137.4
2166
Male, age 80, both hemispheres
185.0
2368
Female, age 91, both hemispheres
162.7
1983
Male, age 76, both hemispheres
127.7
2159
Male, age 61, both hemispheres
124.7
2735
Female, age 85, both hemispheres
86.8
Nucleus raphe magnus nTPM: 132.4
2459
Female, age 91, both hemispheres
171.4
2051
Male, age 76, both hemispheres
153.8
2455
Male, age 74, both hemispheres
150.2
2328
Male, age 80, both hemispheres
145.6
2172
Female, age 85, both hemispheres
93.0
2160
Male, age 61, both hemispheres
80.2
Paramedian reticular nucleus nTPM: 169.6
2052
Male, age 76, both hemispheres
219.7
2057
Male, age 80, both hemispheres
171.7
2313
Male, age 61, both hemispheres
149.8
2050
Female, age 85, both hemispheres
137.2
Pedunculopontine tegmental nucleus nTPM: 178.2
2338
Male, age 61, both hemispheres
225.1
2334
Male, age 80, both hemispheres
177.1
1921
Female, age 85, both hemispheres
132.3
Pontine nuclei nTPM: 159.7
2319
Female, age 91, both hemispheres
223.2
2115
Male, age 80, left hemisphere
219.3
2454
Male, age 74, left hemisphere
184.8
2109
Female, age 72, unknown
175.1
1968
Male, age 76, left hemisphere
143.7
1863
Male, age 55, unknown
130.9
2727
Male, age 61, right hemisphere
101.1
2787
Female, age 85, both hemispheres
99.5
Pontine raphe nucleus nTPM: 137.6
2853
Male, age 76, midline
154.8
2122
Female, age 85, midline
120.5
Posteroventral cochlear nucleus nTPM: 232.3
2135
Female, age 91, both hemispheres
303.5
2341
Male, age 80, both hemispheres
278.5
2070
Male, age 76, both hemispheres
208.3
2371
Male, age 61, both hemispheres
207.7
2752
Female, age 85, both hemispheres
163.6
Principal sensory trigeminal nucleus nTPM: 161.6
2367
Female, age 91, left hemisphere
226.4
2324
Male, age 76, both hemispheres
184.7
2008
Male, age 80, left hemisphere
126.8
2158
Male, age 61, both hemispheres
108.6
Reticular pontine nucleus, caudal nTPM: 173.4
2457
Female, age 91, both hemispheres
208.6
2559
Male, age 74, both hemispheres
192.5
2092
Male, age 76, both hemispheres
173.1
2332
Male, age 80, right hemisphere
119.4
Reticular pontine nucleus, oral nTPM: 175.2
2366
Female, age 91, both hemispheres
220.7
2167
Male, age 76, both hemispheres
182.6
1939
Male, age 80, both hemispheres
179.6
2361
Male, age 74, both hemispheres
158.8
2012
Female, age 85, both hemispheres
134.1
Reticulotegmental nucleus nTPM: 171.0
2322
Female, age 91, both hemispheres
189.9
2452
Male, age 74, both hemispheres
181.0
2333
Male, age 80, both hemispheres
165.5
2325
Male, age 76, both hemispheres
147.7
Spinal trigeminal nucleus, oral nTPM: 168.6
2164
Male, age 80, both hemispheres
197.7
1978
Male, age 76, both hemispheres
182.1
2737
Female, age 85, both hemispheres
126.1
Subcoeruleus area nTPM: 172.1
2369
Female, age 85, left hemisphere
205.1
2451
Male, age 74, both hemispheres
190.1
1958
Male, age 80, both hemispheres
162.5
2323
Female, age 91, left hemisphere
154.2
2089
Male, age 76, left hemisphere
148.4
Superior olive nTPM: 170.0
2561
Female, age 91, both hemispheres
200.6
2364
Male, age 74, right hemisphere
183.9
2020
Male, age 76, both hemispheres
171.4
2329
Male, age 80, right hemisphere
171.4
1875
Female, age 85, both hemispheres
122.9
Ventral periolivary nuclei nTPM: 154.6
2023
Male, age 76, both hemispheres
197.4
2794
Female, age 91, left hemisphere
179.3
2165
Male, age 80, both hemispheres
135.5
2130
Female, age 85, both hemispheres
106.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 174.1
2840
Female, age 85, both hemispheres
194.4
2359
Male, age 61, both hemispheres
183.6
2161
Male, age 80, both hemispheres
178.6
2456
Female, age 91, both hemispheres
171.6
1959
Male, age 76, both hemispheres
163.9
2449
Male, age 74, both hemispheres
152.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
137.9
Pig sample
Sample description
nTPM
Pons nTPM: 138.0
Samples: 4
Max nTPM: 164.4
Min nTPM: 105.0
Sample A
Female
105.0
Sample B
Female
123.7
Sample C
Male
158.7
Sample D
Male
164.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
