HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.3 nTPM
HPA Brain:30.3 nTPM
GTEx:21.3 nTPM
FANTOM5:70.1 Scaled Tags Per Million
Pig:40.5 nTPM
Mouse:52.0 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
1898 Male, age 80, left hemisphere 24.1
2529 Female, age 94, left hemisphere 21.8
2621 Female, age 67, right hemisphere 20.5
1855 Male, age 76, left hemisphere 20.4
1911 Female, age 85, right hemisphere 20.4
2148 Female, age 91, left hemisphere 18.9
Dentate gyrus
nTPM: 21.1
2530 Female, age 94, left hemisphere 22.1
1927 Female, age 91, both hemispheres 22.0
2010 Male, age 76, both hemispheres 21.9
2528 Male, age 74, both hemispheres 21.3
2531 Female, age 67, both hemispheres 20.2
2246 Female, age 85, both hemispheres 19.1
Entorhinal gyrus
nTPM: 23.7
1938 Female, age 85, left hemisphere 28.1
1787 Male, age 76, left hemisphere 27.5
2764 Male, age 80, right hemisphere 23.4
2613 Female, age 94, left hemisphere 22.7
2686 Male, age 75, right hemisphere 21.3
2117 Female, age 91, right hemisphere 19.3
Hippocampus, CA1
nTPM: 22.9
2749 Male, age 80, left hemisphere 28.4
2045 Male, age 76, both hemispheres 24.0
2082 Female, age 91, right hemisphere 21.8
1873 Female, age 85, both hemispheres 20.7
2527 Male, age 74, both hemispheres 19.6
Hippocampus, CA2
nTPM: 23.0
1940 Female, age 85, left hemisphere 25.2
2437 Female, age 94, left hemisphere 24.0
1892 Male, age 76, both hemispheres 23.9
2113 Female, age 91, right hemisphere 22.5
2249 Male, age 74, both hemispheres 22.5
1963 Male, age 80, left hemisphere 19.8
Hippocampus, CA3
nTPM: 21.9
2137 Male, age 80, left hemisphere 26.7
1891 Female, age 85, both hemispheres 22.1
1867 Male, age 76, both hemispheres 22.0
2620 Female, age 94, left hemisphere 21.7
2436 Male, age 74, both hemispheres 19.9
2861 Female, age 67, both hemispheres 18.8
Parahippocampal cortex
nTPM: 22.4
1850 Male, age 80, both hemispheres 30.2
1990 Female, age 91, right hemisphere 26.9
1933 Female, age 85, both hemispheres 23.4
2018 Male, age 76, both hemispheres 23.2
2532 Female, age 72, left hemisphere 22.1
2693 Female, age 94, both hemispheres 22.1
2245 Female, age 91, both hemispheres 21.4
2250 Female, age 67, right hemisphere 20.0
2622 Female, age 67, right hemisphere 18.6
2692 Male, age 74, both hemispheres 16.1
Perirhinal gyrus
nTPM: 30.3
1841 Female, age 85, right hemisphere 33.6
1794 Male, age 80, right hemisphere 33.0
1847 Female, age 91, left hemisphere 29.3
2521 Female, age 94, right hemisphere 28.4
2848 Male, age 76, right hemisphere 27.1
Subiculum
nTPM: 22.0
1977 Female, age 85, both hemispheres 23.9
1901 Male, age 80, both hemispheres 23.5
2438 Female, age 94, left hemisphere 22.6
2729 Female, age 91, right hemisphere 22.5
2042 Male, age 76, both hemispheres 22.1
2619 Male, age 74, both hemispheres 17.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 54.3
Min nTPM: 9.1
Std nTPM: 5.9
Median nTPM: 20.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 50.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 35.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 35.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 34.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 33.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 33.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 32.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 31.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 31.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.1
FF:10169-103B7 60 years, female 76.8
FF:10153-102I9 76 years, female 63.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.5
Pig sample Sample description nTPM
Subiculum
nTPM: 36.4
Samples: 4

Max nTPM: 38.2
Min nTPM: 33.9
Sample A Female 38.2
Sample B Female 38.0
Sample C Male 35.5
Sample D Male 33.9
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 41.1
Min nTPM: 30.7
Sample A Female 36.8
Sample B Female 41.1
Sample C Male 30.7
Sample D Male 31.0
Entorhinal cortex
nTPM: 32.1
Samples: 4

Max nTPM: 34.8
Min nTPM: 26.8
Sample A Female 32.3
Sample B Female 34.8
Sample C Male 34.6
Sample D Male 26.8
Ventral hippocampus
nTPM: 40.5
Samples: 4

Max nTPM: 46.0
Min nTPM: 33.2
Sample A Female 41.4
Sample B Female 46.0
Sample C Male 41.5
Sample D Male 33.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.0
Samples: 4

Max nTPM: 56.8
Min nTPM: 45.9
Sample A Male 51.0
Sample B Male 54.1
Sample C Female 56.8
Sample D Female 45.9
Hippocampal formation
nTPM: 49.2
Samples: 4

Max nTPM: 54.1
Min nTPM: 47.2
Sample A Male 54.1
Sample B Male 47.6
Sample C Female 47.8
Sample D Female 47.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
68861960 Antisense, RP_050301_01_C04, Mouse strain C57BL/6J (56 days, male) 8.5
70231304 Antisense, RP_050301_01_C04, Mouse strain C57BL/6J (56 days, male) 6.6

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