HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:36.3 nTPM
HPA Brain:75.9 nTPM
GTEx:36.3 nTPM
FANTOM5:133.4 Scaled Tags Per Million
Pig:149.5 nTPM
Mouse:131.1 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053272
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.9
Sample id Sample description nTPM
Hippocampus
nTPM: 64.6
1898 Male, age 80, left hemisphere 82.4
1911 Female, age 85, right hemisphere 67.4
1855 Male, age 76, left hemisphere 63.6
2529 Female, age 94, left hemisphere 62.1
2621 Female, age 67, right hemisphere 61.4
2148 Female, age 91, left hemisphere 50.4
Dentate gyrus
nTPM: 66.6
2010 Male, age 76, both hemispheres 82.1
1927 Female, age 91, both hemispheres 73.8
2528 Male, age 74, both hemispheres 70.7
2530 Female, age 94, left hemisphere 65.4
2246 Female, age 85, both hemispheres 60.5
2531 Female, age 67, both hemispheres 47.0
Entorhinal gyrus
nTPM: 57.2
1938 Female, age 85, left hemisphere 72.8
2117 Female, age 91, right hemisphere 69.7
1787 Male, age 76, left hemisphere 58.8
2764 Male, age 80, right hemisphere 52.6
2613 Female, age 94, left hemisphere 46.8
2686 Male, age 75, right hemisphere 42.4
Hippocampus, CA1
nTPM: 75.9
2749 Male, age 80, left hemisphere 104.9
1873 Female, age 85, both hemispheres 77.5
2527 Male, age 74, both hemispheres 71.5
2045 Male, age 76, both hemispheres 68.2
2082 Female, age 91, right hemisphere 57.7
Hippocampus, CA2
nTPM: 69.9
2249 Male, age 74, both hemispheres 83.2
1892 Male, age 76, both hemispheres 78.9
1963 Male, age 80, left hemisphere 78.9
1940 Female, age 85, left hemisphere 67.4
2113 Female, age 91, right hemisphere 56.6
2437 Female, age 94, left hemisphere 54.7
Hippocampus, CA3
nTPM: 67.1
2137 Male, age 80, left hemisphere 83.1
1867 Male, age 76, both hemispheres 82.7
2436 Male, age 74, both hemispheres 77.1
1891 Female, age 85, both hemispheres 65.9
2620 Female, age 94, left hemisphere 49.5
2861 Female, age 67, both hemispheres 44.4
Parahippocampal cortex
nTPM: 59.9
1850 Male, age 80, both hemispheres 72.6
2250 Female, age 67, right hemisphere 67.7
1933 Female, age 85, both hemispheres 67.1
2018 Male, age 76, both hemispheres 65.4
1990 Female, age 91, right hemisphere 64.9
2532 Female, age 72, left hemisphere 58.8
2245 Female, age 91, both hemispheres 58.5
2692 Male, age 74, both hemispheres 53.8
2693 Female, age 94, both hemispheres 50.7
2622 Female, age 67, right hemisphere 39.7
Perirhinal gyrus
nTPM: 63.2
1841 Female, age 85, right hemisphere 71.1
1847 Female, age 91, left hemisphere 71.1
1794 Male, age 80, right hemisphere 62.3
2521 Female, age 94, right hemisphere 60.3
2848 Male, age 76, right hemisphere 51.4
Subiculum
nTPM: 64.1
2042 Male, age 76, both hemispheres 77.9
1901 Male, age 80, both hemispheres 71.1
1977 Female, age 85, both hemispheres 64.5
2729 Female, age 91, right hemisphere 62.9
2619 Male, age 74, both hemispheres 56.1
2438 Female, age 94, left hemisphere 51.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.3
Samples: 197

Max nTPM: 79.0
Min nTPM: 17.7
Std nTPM: 8.6
Median nTPM: 36.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 79.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 62.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 60.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 59.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 56.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 54.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 53.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 53.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 53.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 50.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 50.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.4
FF:10169-103B7 60 years, female 156.8
FF:10153-102I9 76 years, female 110.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 149.5
Pig sample Sample description nTPM
Subiculum
nTPM: 118.1
Samples: 4

Max nTPM: 144.6
Min nTPM: 104.9
Sample A Female 144.6
Sample B Female 108.5
Sample C Male 104.9
Sample D Male 114.5
Dorsal hippocampus
nTPM: 149.5
Samples: 4

Max nTPM: 197.8
Min nTPM: 110.8
Sample A Female 197.8
Sample B Female 135.6
Sample C Male 153.7
Sample D Male 110.8
Entorhinal cortex
nTPM: 122.6
Samples: 4

Max nTPM: 149.5
Min nTPM: 99.5
Sample A Female 118.0
Sample B Female 149.5
Sample C Male 123.4
Sample D Male 99.5
Ventral hippocampus
nTPM: 124.4
Samples: 4

Max nTPM: 174.4
Min nTPM: 97.8
Sample A Female 174.4
Sample B Female 97.8
Sample C Male 103.8
Sample D Male 121.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.1
Samples: 4

Max nTPM: 137.2
Min nTPM: 124.7
Sample A Male 125.7
Sample B Male 136.9
Sample C Female 124.7
Sample D Female 137.2
Hippocampal formation
nTPM: 119.5
Samples: 4

Max nTPM: 130.7
Min nTPM: 111.8
Sample A Male 130.7
Sample B Male 112.9
Sample C Female 122.4
Sample D Female 111.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
293900 Antisense, RP_040617_01_E10, Mouse strain C57BL/6J (56 days, male) 11.3
324215 Antisense, RP_040617_01_E10, Mouse strain C57BL/6J (56 days, male) 10.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org