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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
283.2
nTPM
FANTOM5:
232.4
Scaled Tags Per Million
Pig:
100.3
nTPM
Allen mouse:
10.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
283.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 216.2
2301
Female, age 85, both hemispheres
234.6
2188
Female, age 91, both hemispheres
222.7
2090
Male, age 80, both hemispheres
220.7
1984
Male, age 76, both hemispheres
186.6
Dorsal cochlear nucleus nTPM: 212.5
2802
Male, age 74, right hemisphere
239.0
2187
Female, age 91, both hemispheres
217.9
2378
Male, age 80, both hemispheres
210.5
2370
Male, age 61, both hemispheres
200.2
2058
Male, age 76, both hemispheres
194.9
Dorsal tegmental nucleus nTPM: 214.2
2358
Male, age 61, both hemispheres
242.0
2083
Male, age 80, both hemispheres
215.7
2326
Male, age 74, both hemispheres
200.9
1936
Male, age 76, left hemisphere
198.0
Dorsolateral tegmental area nTPM: 197.2
2141
Male, age 76, both hemispheres
209.9
2654
Male, age 80, both hemispheres
209.1
2751
Female, age 85, both hemispheres
202.8
2360
Male, age 74, both hemispheres
188.3
2337
Male, age 61, both hemispheres
176.0
Kolliker-Fuse nucleus nTPM: 250.2
2315
Male, age 76, right hemisphere
302.6
2163
Male, age 80, both hemispheres
224.7
2793
Female, age 91, left hemisphere
223.2
Lateral lemniscal nuclei nTPM: 239.5
2169
Male, age 76, both hemispheres
275.5
2746
Female, age 85, left hemisphere
252.2
2036
Male, age 80, both hemispheres
247.9
2453
Male, age 74, right hemisphere
231.2
2320
Female, age 91, left hemisphere
190.7
Lateral parabrachial nucleus nTPM: 243.4
2139
Female, age 85, right hemisphere
293.2
2013
Male, age 80, both hemispheres
251.8
2792
Male, age 76, both hemispheres
249.1
2790
Male, age 61, both hemispheres
179.6
Lateral vestibular nucleus nTPM: 201.0
2311
Male, age 80, both hemispheres
201.1
2184
Male, age 76, both hemispheres
201.0
Locus coeruleus nTPM: 272.1
2014
Male, age 55, unknown
304.5
2123
Female, age 91, both hemispheres
302.1
2317
Female, age 72, unknown
285.9
1980
Male, age 76, both hemispheres
262.9
2720
Male, age 74, both hemispheres
260.0
2788
Male, age 74, unknown
247.0
2162
Male, age 80, both hemispheres
242.5
Medial parabrachial nucleus nTPM: 205.9
2170
Female, age 91, both hemispheres
234.7
2854
Male, age 80, both hemispheres
234.4
2786
Male, age 76, both hemispheres
192.1
2463
Female, age 85, right hemisphere
190.3
2156
Male, age 61, both hemispheres
177.9
Medial periolivary nuclei nTPM: 247.5
2171
Female, age 85, both hemispheres
290.2
2063
Male, age 76, both hemispheres
272.4
2791
Male, age 74, right hemisphere
248.2
2081
Male, age 80, both hemispheres
226.7
2458
Female, age 91, both hemispheres
200.1
Motor facial nucleus nTPM: 246.6
2062
Male, age 76, both hemispheres
273.8
2795
Female, age 91, both hemispheres
262.0
2365
Male, age 74, right hemisphere
247.0
2697
Female, age 85, both hemispheres
237.6
2126
Male, age 61, both hemispheres
230.5
2327
Male, age 80, both hemispheres
228.7
Motor trigeminal nucleus nTPM: 210.5
2079
Male, age 80, both hemispheres
241.1
2560
Male, age 74, both hemispheres
233.8
2321
Female, age 91, both hemispheres
203.1
2335
Male, age 61, both hemispheres
189.5
2309
Male, age 76, both hemispheres
185.0
Nuclei of the trapezoid body nTPM: 267.6
2159
Male, age 61, both hemispheres
335.8
2735
Female, age 85, both hemispheres
276.8
1983
Male, age 76, both hemispheres
261.6
2368
Female, age 91, both hemispheres
232.5
2166
Male, age 80, both hemispheres
231.4
Nucleus raphe magnus nTPM: 283.2
2160
Male, age 61, both hemispheres
412.4
2172
Female, age 85, both hemispheres
310.2
2051
Male, age 76, both hemispheres
273.0
2328
Male, age 80, both hemispheres
248.9
2455
Male, age 74, both hemispheres
239.3
2459
Female, age 91, both hemispheres
215.2
Paramedian reticular nucleus nTPM: 221.8
2050
Female, age 85, both hemispheres
266.8
2313
Male, age 61, both hemispheres
228.2
2057
Male, age 80, both hemispheres
212.2
2052
Male, age 76, both hemispheres
180.1
Pedunculopontine tegmental nucleus nTPM: 206.0
2334
Male, age 80, both hemispheres
220.5
1921
Female, age 85, both hemispheres
210.5
2338
Male, age 61, both hemispheres
186.9
Pontine nuclei nTPM: 276.1
2727
Male, age 61, right hemisphere
374.0
2787
Female, age 85, both hemispheres
342.2
1863
Male, age 55, unknown
317.5
2109
Female, age 72, unknown
286.5
1968
Male, age 76, left hemisphere
257.4
2115
Male, age 80, left hemisphere
239.8
2319
Female, age 91, both hemispheres
204.0
2454
Male, age 74, left hemisphere
187.6
Pontine raphe nucleus nTPM: 230.2
2122
Female, age 85, midline
255.0
2853
Male, age 76, midline
205.3
Posteroventral cochlear nucleus nTPM: 195.0
2341
Male, age 80, both hemispheres
200.5
2135
Female, age 91, both hemispheres
199.8
2752
Female, age 85, both hemispheres
198.5
2371
Male, age 61, both hemispheres
190.7
2070
Male, age 76, both hemispheres
185.6
Principal sensory trigeminal nucleus nTPM: 254.8
2158
Male, age 61, both hemispheres
370.1
2008
Male, age 80, left hemisphere
254.1
2367
Female, age 91, left hemisphere
199.2
2324
Male, age 76, both hemispheres
195.9
Reticular pontine nucleus, caudal nTPM: 215.6
2332
Male, age 80, right hemisphere
255.9
2092
Male, age 76, both hemispheres
238.8
2457
Female, age 91, both hemispheres
187.6
2559
Male, age 74, both hemispheres
180.1
Reticular pontine nucleus, oral nTPM: 214.1
2012
Female, age 85, both hemispheres
240.8
1939
Male, age 80, both hemispheres
228.7
2366
Female, age 91, both hemispheres
211.6
2167
Male, age 76, both hemispheres
201.6
2361
Male, age 74, both hemispheres
187.7
Reticulotegmental nucleus nTPM: 216.8
2325
Male, age 76, both hemispheres
240.8
2333
Male, age 80, both hemispheres
213.2
2322
Female, age 91, both hemispheres
206.9
2452
Male, age 74, both hemispheres
206.2
Spinal trigeminal nucleus, oral nTPM: 188.2
2164
Male, age 80, both hemispheres
212.4
2737
Female, age 85, both hemispheres
189.6
1978
Male, age 76, both hemispheres
162.7
Subcoeruleus area nTPM: 208.9
1958
Male, age 80, both hemispheres
227.8
2089
Male, age 76, left hemisphere
217.4
2323
Female, age 91, left hemisphere
210.0
2451
Male, age 74, both hemispheres
197.5
2369
Female, age 85, left hemisphere
191.8
Superior olive nTPM: 243.7
1875
Female, age 85, both hemispheres
280.7
2020
Male, age 76, both hemispheres
245.3
2329
Male, age 80, right hemisphere
236.2
2364
Male, age 74, right hemisphere
236.1
2561
Female, age 91, both hemispheres
220.1
Ventral periolivary nuclei nTPM: 256.0
2130
Female, age 85, both hemispheres
303.6
2165
Male, age 80, both hemispheres
271.6
2023
Male, age 76, both hemispheres
233.1
2794
Female, age 91, left hemisphere
216.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 229.9
2840
Female, age 85, both hemispheres
257.8
1959
Male, age 76, both hemispheres
246.9
2161
Male, age 80, both hemispheres
242.2
2449
Male, age 74, both hemispheres
229.1
2456
Female, age 91, both hemispheres
216.5
2359
Male, age 61, both hemispheres
187.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
100.3
Pig sample
Sample description
nTPM
Pons nTPM: 100.3
Samples: 4
Max nTPM: 125.4
Min nTPM: 88.3
Sample A
Female
125.4
Sample B
Female
88.3
Sample C
Male
96.2
Sample D
Male
91.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
