HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:520.8 nTPM
HPA Brain:212.1 nTPM
GTEx:520.8 nTPM
FANTOM5:180.0 Scaled Tags Per Million
Pig:206.3 nTPM
Mouse:561.4 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055878Antibody HPA061979
Glial cells Not detectedLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 212.1
Sample id Sample description nTPM
Hippocampus
nTPM: 212.1
1898 Male, age 80, left hemisphere 257.8
2529 Female, age 94, left hemisphere 237.9
2621 Female, age 67, right hemisphere 213.7
1911 Female, age 85, right hemisphere 194.9
2148 Female, age 91, left hemisphere 188.9
1855 Male, age 76, left hemisphere 179.4
Dentate gyrus
nTPM: 210.1
2530 Female, age 94, left hemisphere 246.8
2010 Male, age 76, both hemispheres 229.2
2531 Female, age 67, both hemispheres 224.2
2528 Male, age 74, both hemispheres 195.2
1927 Female, age 91, both hemispheres 184.8
2246 Female, age 85, both hemispheres 180.5
Entorhinal gyrus
nTPM: 206.8
2686 Male, age 75, right hemisphere 250.5
2117 Female, age 91, right hemisphere 223.8
1787 Male, age 76, left hemisphere 207.9
2764 Male, age 80, right hemisphere 199.1
1938 Female, age 85, left hemisphere 192.7
2613 Female, age 94, left hemisphere 166.6
Hippocampus, CA1
nTPM: 192.6
2749 Male, age 80, left hemisphere 201.7
2082 Female, age 91, right hemisphere 196.6
2045 Male, age 76, both hemispheres 195.8
1873 Female, age 85, both hemispheres 193.1
2527 Male, age 74, both hemispheres 175.7
Hippocampus, CA2
nTPM: 195.1
1963 Male, age 80, left hemisphere 229.4
2437 Female, age 94, left hemisphere 204.2
1892 Male, age 76, both hemispheres 203.7
2113 Female, age 91, right hemisphere 188.2
1940 Female, age 85, left hemisphere 173.9
2249 Male, age 74, both hemispheres 171.1
Hippocampus, CA3
nTPM: 193.3
1867 Male, age 76, both hemispheres 224.1
2861 Female, age 67, both hemispheres 219.5
1891 Female, age 85, both hemispheres 209.1
2137 Male, age 80, left hemisphere 172.9
2620 Female, age 94, left hemisphere 168.1
2436 Male, age 74, both hemispheres 165.9
Parahippocampal cortex
nTPM: 172.3
2018 Male, age 76, both hemispheres 219.5
1850 Male, age 80, both hemispheres 189.5
1990 Female, age 91, right hemisphere 183.8
1933 Female, age 85, both hemispheres 177.6
2250 Female, age 67, right hemisphere 168.9
2532 Female, age 72, left hemisphere 165.0
2692 Male, age 74, both hemispheres 164.4
2622 Female, age 67, right hemisphere 160.9
2245 Female, age 91, both hemispheres 159.8
2693 Female, age 94, both hemispheres 133.9
Perirhinal gyrus
nTPM: 185.2
1847 Female, age 91, left hemisphere 209.8
1794 Male, age 80, right hemisphere 197.8
1841 Female, age 85, right hemisphere 194.7
2848 Male, age 76, right hemisphere 163.3
2521 Female, age 94, right hemisphere 160.2
Subiculum
nTPM: 195.0
2042 Male, age 76, both hemispheres 233.5
1977 Female, age 85, both hemispheres 221.1
1901 Male, age 80, both hemispheres 194.5
2619 Male, age 74, both hemispheres 185.0
2729 Female, age 91, right hemisphere 184.1
2438 Female, age 94, left hemisphere 152.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 520.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 520.8
Samples: 197

Max nTPM: 1155.9
Min nTPM: 263.8
Std nTPM: 172.6
Median nTPM: 483.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1155.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1144.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1136.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1075.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1059.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1000.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 920.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 910.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 872.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 854.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 849.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.0
FF:10153-102I9 76 years, female 204.2
FF:10169-103B7 60 years, female 155.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 206.3
Pig sample Sample description nTPM
Subiculum
nTPM: 159.1
Samples: 4

Max nTPM: 216.7
Min nTPM: 132.9
Sample A Female 216.7
Sample B Female 151.0
Sample C Male 132.9
Sample D Male 135.6
Dorsal hippocampus
nTPM: 206.3
Samples: 4

Max nTPM: 271.5
Min nTPM: 144.2
Sample A Female 271.5
Sample B Female 177.6
Sample C Male 231.9
Sample D Male 144.2
Entorhinal cortex
nTPM: 160.0
Samples: 4

Max nTPM: 188.5
Min nTPM: 123.1
Sample A Female 144.9
Sample B Female 188.5
Sample C Male 183.5
Sample D Male 123.1
Ventral hippocampus
nTPM: 182.3
Samples: 4

Max nTPM: 223.4
Min nTPM: 151.5
Sample A Female 174.9
Sample B Female 151.5
Sample C Male 223.4
Sample D Male 179.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 561.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 510.2
Samples: 4

Max nTPM: 542.9
Min nTPM: 485.8
Sample A Male 490.1
Sample B Male 485.8
Sample C Female 542.9
Sample D Female 521.9
Hippocampal formation
nTPM: 561.4
Samples: 4

Max nTPM: 614.4
Min nTPM: 509.4
Sample A Male 614.4
Sample B Male 509.4
Sample C Female 549.0
Sample D Female 572.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
77464982 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 8.6
77868800 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 3.4

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