HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:3.7 nTPM
HPA Brain:23.1 nTPM
GTEx:3.7 nTPM
FANTOM5:7.2 Scaled Tags Per Million
Pig:8.3 nTPM
Mouse:1.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046537
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
2529 Female, age 94, left hemisphere 29.9
2621 Female, age 67, right hemisphere 24.4
1911 Female, age 85, right hemisphere 22.6
2148 Female, age 91, left hemisphere 21.3
1855 Male, age 76, left hemisphere 18.5
1898 Male, age 80, left hemisphere 13.1
Dentate gyrus
nTPM: 23.0
2530 Female, age 94, left hemisphere 33.9
2531 Female, age 67, both hemispheres 26.0
2246 Female, age 85, both hemispheres 22.3
2528 Male, age 74, both hemispheres 19.0
1927 Female, age 91, both hemispheres 18.6
2010 Male, age 76, both hemispheres 17.9
Entorhinal gyrus
nTPM: 20.6
2613 Female, age 94, left hemisphere 24.8
2686 Male, age 75, right hemisphere 24.7
1787 Male, age 76, left hemisphere 21.2
1938 Female, age 85, left hemisphere 18.7
2117 Female, age 91, right hemisphere 17.4
2764 Male, age 80, right hemisphere 17.1
Hippocampus, CA1
nTPM: 18.5
2527 Male, age 74, both hemispheres 19.9
2045 Male, age 76, both hemispheres 19.8
1873 Female, age 85, both hemispheres 18.8
2082 Female, age 91, right hemisphere 17.8
2749 Male, age 80, left hemisphere 16.3
Hippocampus, CA2
nTPM: 20.7
2437 Female, age 94, left hemisphere 28.1
1940 Female, age 85, left hemisphere 20.3
1963 Male, age 80, left hemisphere 20.3
2113 Female, age 91, right hemisphere 19.8
2249 Male, age 74, both hemispheres 18.5
1892 Male, age 76, both hemispheres 17.4
Hippocampus, CA3
nTPM: 23.1
2861 Female, age 67, both hemispheres 35.9
2620 Female, age 94, left hemisphere 23.9
2137 Male, age 80, left hemisphere 22.1
1867 Male, age 76, both hemispheres 21.8
1891 Female, age 85, both hemispheres 19.0
2436 Male, age 74, both hemispheres 15.9
Parahippocampal cortex
nTPM: 22.9
2245 Female, age 91, both hemispheres 33.9
2622 Female, age 67, right hemisphere 31.0
2532 Female, age 72, left hemisphere 26.5
2018 Male, age 76, both hemispheres 23.7
2692 Male, age 74, both hemispheres 21.8
2693 Female, age 94, both hemispheres 21.0
1850 Male, age 80, both hemispheres 18.1
1990 Female, age 91, right hemisphere 17.8
1933 Female, age 85, both hemispheres 17.7
2250 Female, age 67, right hemisphere 17.7
Perirhinal gyrus
nTPM: 18.1
2848 Male, age 76, right hemisphere 22.1
1841 Female, age 85, right hemisphere 20.1
2521 Female, age 94, right hemisphere 18.4
1794 Male, age 80, right hemisphere 15.8
1847 Female, age 91, left hemisphere 14.1
Subiculum
nTPM: 21.6
2438 Female, age 94, left hemisphere 30.1
2619 Male, age 74, both hemispheres 23.1
2042 Male, age 76, both hemispheres 19.6
2729 Female, age 91, right hemisphere 19.5
1901 Male, age 80, both hemispheres 19.0
1977 Female, age 85, both hemispheres 18.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.7
Samples: 197

Max nTPM: 16.6
Min nTPM: 0.3
Std nTPM: 2.3
Median nTPM: 3.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 16.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 11.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 11.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 10.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 9.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 8.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 8.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 8.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 7.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 7.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.2
FF:10153-102I9 76 years, female 10.3
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.3
Pig sample Sample description nTPM
Subiculum
nTPM: 6.9
Samples: 4

Max nTPM: 9.1
Min nTPM: 4.7
Sample A Female 4.7
Sample B Female 6.2
Sample C Male 7.7
Sample D Male 9.1
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 7.5
Min nTPM: 3.5
Sample A Female 3.5
Sample B Female 4.9
Sample C Male 7.5
Sample D Male 5.9
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.9
Sample A Female 8.6
Sample B Female 6.9
Sample C Male 8.8
Sample D Male 8.8
Ventral hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.5
Sample A Female 6.1
Sample B Female 7.5
Sample C Male 5.8
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.9
Sample A Male 1.9
Sample B Male 1.3
Sample C Female 1.1
Sample D Female 0.9
Hippocampal formation
nTPM: 1.3
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.8
Sample A Male 1.6
Sample B Male 1.3
Sample C Female 0.8
Sample D Female 1.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
77924536 Antisense, RP_070219_02_B08, Mouse strain C57BL/6J (56 days, male) 0.1

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