HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:68.9 nTPM
HPA Brain:30.8 nTPM
GTEx:68.9 nTPM
FANTOM5:145.3 Scaled Tags Per Million
Pig:116.4 nTPM
Mouse:112.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042883Antibody HPA056437Antibody CAB033874
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.8
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
1898 Male, age 80, left hemisphere 34.5
2529 Female, age 94, left hemisphere 28.9
1855 Male, age 76, left hemisphere 26.4
2621 Female, age 67, right hemisphere 26.3
1911 Female, age 85, right hemisphere 25.9
2148 Female, age 91, left hemisphere 22.2
Dentate gyrus
nTPM: 24.8
2010 Male, age 76, both hemispheres 30.0
2530 Female, age 94, left hemisphere 27.4
1927 Female, age 91, both hemispheres 25.6
2246 Female, age 85, both hemispheres 23.9
2528 Male, age 74, both hemispheres 23.4
2531 Female, age 67, both hemispheres 18.2
Entorhinal gyrus
nTPM: 25.8
1938 Female, age 85, left hemisphere 31.8
1787 Male, age 76, left hemisphere 28.6
2764 Male, age 80, right hemisphere 25.7
2117 Female, age 91, right hemisphere 25.2
2686 Male, age 75, right hemisphere 22.7
2613 Female, age 94, left hemisphere 20.5
Hippocampus, CA1
nTPM: 28.3
2749 Male, age 80, left hemisphere 37.5
1873 Female, age 85, both hemispheres 29.6
2527 Male, age 74, both hemispheres 26.0
2045 Male, age 76, both hemispheres 25.8
2082 Female, age 91, right hemisphere 22.5
Hippocampus, CA2
nTPM: 27.6
1892 Male, age 76, both hemispheres 34.3
1963 Male, age 80, left hemisphere 29.0
2249 Male, age 74, both hemispheres 29.0
1940 Female, age 85, left hemisphere 25.7
2437 Female, age 94, left hemisphere 24.5
2113 Female, age 91, right hemisphere 23.4
Hippocampus, CA3
nTPM: 26.6
1867 Male, age 76, both hemispheres 31.7
2137 Male, age 80, left hemisphere 31.1
1891 Female, age 85, both hemispheres 30.5
2436 Male, age 74, both hemispheres 28.9
2620 Female, age 94, left hemisphere 19.5
2861 Female, age 67, both hemispheres 18.1
Parahippocampal cortex
nTPM: 26.6
1850 Male, age 80, both hemispheres 35.5
2018 Male, age 76, both hemispheres 30.4
1933 Female, age 85, both hemispheres 29.8
2245 Female, age 91, both hemispheres 26.6
2532 Female, age 72, left hemisphere 26.1
2250 Female, age 67, right hemisphere 25.9
1990 Female, age 91, right hemisphere 25.8
2693 Female, age 94, both hemispheres 25.6
2692 Male, age 74, both hemispheres 22.6
2622 Female, age 67, right hemisphere 17.7
Perirhinal gyrus
nTPM: 30.8
1841 Female, age 85, right hemisphere 33.3
1847 Female, age 91, left hemisphere 32.8
1794 Male, age 80, right hemisphere 31.0
2848 Male, age 76, right hemisphere 30.0
2521 Female, age 94, right hemisphere 27.2
Subiculum
nTPM: 26.9
1977 Female, age 85, both hemispheres 29.9
1901 Male, age 80, both hemispheres 29.0
2438 Female, age 94, left hemisphere 28.6
2042 Male, age 76, both hemispheres 27.6
2619 Male, age 74, both hemispheres 23.8
2729 Female, age 91, right hemisphere 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.9
Samples: 197

Max nTPM: 165.5
Min nTPM: 37.5
Std nTPM: 14.9
Median nTPM: 66.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 113.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 110.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 103.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 102.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 101.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 99.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 99.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 98.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 96.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 95.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 145.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 145.3
FF:10169-103B7 60 years, female 165.1
FF:10153-102I9 76 years, female 125.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 116.4
Pig sample Sample description nTPM
Subiculum
nTPM: 108.0
Samples: 4

Max nTPM: 139.2
Min nTPM: 86.8
Sample A Female 139.2
Sample B Female 99.7
Sample C Male 86.8
Sample D Male 106.1
Dorsal hippocampus
nTPM: 116.4
Samples: 4

Max nTPM: 155.4
Min nTPM: 92.2
Sample A Female 155.4
Sample B Female 104.1
Sample C Male 114.0
Sample D Male 92.2
Entorhinal cortex
nTPM: 103.5
Samples: 4

Max nTPM: 123.0
Min nTPM: 82.6
Sample A Female 105.9
Sample B Female 123.0
Sample C Male 102.5
Sample D Male 82.6
Ventral hippocampus
nTPM: 96.6
Samples: 4

Max nTPM: 117.1
Min nTPM: 82.2
Sample A Female 117.1
Sample B Female 82.2
Sample C Male 85.3
Sample D Male 101.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.6
Samples: 4

Max nTPM: 120.8
Min nTPM: 92.3
Sample A Male 102.9
Sample B Male 106.5
Sample C Female 120.8
Sample D Female 92.3
Hippocampal formation
nTPM: 112.7
Samples: 4

Max nTPM: 123.8
Min nTPM: 105.2
Sample A Male 123.8
Sample B Male 105.2
Sample C Female 110.5
Sample D Female 111.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
413815 Antisense, RP_040809_01_F11, Mouse strain C57BL/6J (56 days, male) 1.4

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