HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:19.6 nTPM
HPA Brain:84.8 nTPM
GTEx:19.6 nTPM
FANTOM5:20.7 Scaled Tags Per Million
Pig:56.3 nTPM
Mouse:49.9 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056511
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.8
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
2621 Female, age 67, right hemisphere 46.3
1911 Female, age 85, right hemisphere 44.1
1898 Male, age 80, left hemisphere 42.2
2529 Female, age 94, left hemisphere 41.7
1855 Male, age 76, left hemisphere 40.6
2148 Female, age 91, left hemisphere 37.0
Dentate gyrus
nTPM: 45.4
2530 Female, age 94, left hemisphere 51.6
2531 Female, age 67, both hemispheres 49.8
2246 Female, age 85, both hemispheres 48.2
1927 Female, age 91, both hemispheres 43.6
2010 Male, age 76, both hemispheres 41.6
2528 Male, age 74, both hemispheres 37.4
Entorhinal gyrus
nTPM: 60.0
1787 Male, age 76, left hemisphere 72.9
2613 Female, age 94, left hemisphere 68.6
2764 Male, age 80, right hemisphere 61.3
1938 Female, age 85, left hemisphere 59.2
2686 Male, age 75, right hemisphere 51.1
2117 Female, age 91, right hemisphere 46.9
Hippocampus, CA1
nTPM: 45.0
2749 Male, age 80, left hemisphere 58.9
2045 Male, age 76, both hemispheres 49.0
2527 Male, age 74, both hemispheres 41.7
1873 Female, age 85, both hemispheres 37.8
2082 Female, age 91, right hemisphere 37.4
Hippocampus, CA2
nTPM: 51.8
1940 Female, age 85, left hemisphere 79.5
2437 Female, age 94, left hemisphere 50.9
2113 Female, age 91, right hemisphere 49.2
1892 Male, age 76, both hemispheres 47.0
2249 Male, age 74, both hemispheres 43.0
1963 Male, age 80, left hemisphere 40.9
Hippocampus, CA3
nTPM: 45.5
2137 Male, age 80, left hemisphere 63.6
2861 Female, age 67, both hemispheres 45.2
1867 Male, age 76, both hemispheres 44.8
1891 Female, age 85, both hemispheres 42.1
2620 Female, age 94, left hemisphere 42.1
2436 Male, age 74, both hemispheres 35.0
Parahippocampal cortex
nTPM: 69.0
2693 Female, age 94, both hemispheres 86.4
2532 Female, age 72, left hemisphere 84.9
2245 Female, age 91, both hemispheres 76.8
1850 Male, age 80, both hemispheres 75.5
2622 Female, age 67, right hemisphere 67.3
1933 Female, age 85, both hemispheres 67.1
2250 Female, age 67, right hemisphere 64.7
1990 Female, age 91, right hemisphere 59.7
2018 Male, age 76, both hemispheres 55.8
2692 Male, age 74, both hemispheres 51.5
Perirhinal gyrus
nTPM: 84.8
2521 Female, age 94, right hemisphere 101.9
1794 Male, age 80, right hemisphere 91.5
1841 Female, age 85, right hemisphere 91.3
2848 Male, age 76, right hemisphere 76.6
1847 Female, age 91, left hemisphere 62.7
Subiculum
nTPM: 49.7
1977 Female, age 85, both hemispheres 58.4
1901 Male, age 80, both hemispheres 52.0
2042 Male, age 76, both hemispheres 49.7
2619 Male, age 74, both hemispheres 49.7
2438 Female, age 94, left hemisphere 47.5
2729 Female, age 91, right hemisphere 40.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 51.8
Min nTPM: 10.0
Std nTPM: 6.6
Median nTPM: 17.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 51.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 45.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 40.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 38.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 38.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 37.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 34.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 34.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 34.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.7
FF:10153-102I9 76 years, female 23.9
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.3
Pig sample Sample description nTPM
Subiculum
nTPM: 41.5
Samples: 4

Max nTPM: 48.2
Min nTPM: 36.0
Sample A Female 48.2
Sample B Female 40.4
Sample C Male 36.0
Sample D Male 41.3
Dorsal hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 34.1
Min nTPM: 23.3
Sample A Female 31.4
Sample B Female 27.9
Sample C Male 34.1
Sample D Male 23.3
Entorhinal cortex
nTPM: 56.3
Samples: 4

Max nTPM: 59.5
Min nTPM: 53.0
Sample A Female 59.5
Sample B Female 56.5
Sample C Male 53.0
Sample D Male 56.1
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 29.5
Min nTPM: 25.5
Sample A Female 28.1
Sample B Female 25.6
Sample C Male 25.5
Sample D Male 29.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.9
Samples: 4

Max nTPM: 57.7
Min nTPM: 38.5
Sample A Male 47.0
Sample B Male 57.7
Sample C Female 38.5
Sample D Female 56.4
Hippocampal formation
nTPM: 25.5
Samples: 4

Max nTPM: 27.1
Min nTPM: 24.3
Sample A Male 27.1
Sample B Male 25.3
Sample C Female 25.2
Sample D Female 24.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
76085742 Antisense, RP_060530_01_F02, Mouse strain C57BL/6J (56 days, male) 6.2
69014848 Antisense, RP_050310_01_G12, Mouse strain C57BL/6J (56 days, male) 4.0

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