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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
222.5
nTPM
FANTOM5:
446.3
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
222.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 169.5
2301
Female, age 85, both hemispheres
194.2
2188
Female, age 91, both hemispheres
179.7
1984
Male, age 76, both hemispheres
154.8
2090
Male, age 80, both hemispheres
149.5
Dorsal cochlear nucleus nTPM: 168.9
2802
Male, age 74, right hemisphere
191.0
2187
Female, age 91, both hemispheres
182.6
2370
Male, age 61, both hemispheres
169.9
2058
Male, age 76, both hemispheres
153.1
2378
Male, age 80, both hemispheres
148.0
Dorsal tegmental nucleus nTPM: 175.8
2083
Male, age 80, both hemispheres
203.9
2326
Male, age 74, both hemispheres
184.6
2358
Male, age 61, both hemispheres
161.6
1936
Male, age 76, left hemisphere
153.3
Dorsolateral tegmental area nTPM: 164.1
2751
Female, age 85, both hemispheres
203.9
2654
Male, age 80, both hemispheres
184.5
2141
Male, age 76, both hemispheres
164.0
2337
Male, age 61, both hemispheres
135.8
2360
Male, age 74, both hemispheres
132.2
Kolliker-Fuse nucleus nTPM: 190.1
2793
Female, age 91, left hemisphere
258.2
2163
Male, age 80, both hemispheres
195.0
2315
Male, age 76, right hemisphere
117.1
Lateral lemniscal nuclei nTPM: 216.7
2320
Female, age 91, left hemisphere
224.9
2746
Female, age 85, left hemisphere
221.2
2453
Male, age 74, right hemisphere
218.0
2169
Male, age 76, both hemispheres
215.4
2036
Male, age 80, both hemispheres
204.1
Lateral parabrachial nucleus nTPM: 185.6
2139
Female, age 85, right hemisphere
210.6
2013
Male, age 80, both hemispheres
192.9
2792
Male, age 76, both hemispheres
170.4
2790
Male, age 61, both hemispheres
168.5
Lateral vestibular nucleus nTPM: 180.7
2184
Male, age 76, both hemispheres
195.9
2311
Male, age 80, both hemispheres
165.4
Locus coeruleus nTPM: 210.3
2720
Male, age 74, both hemispheres
258.1
2014
Male, age 55, unknown
227.5
2317
Female, age 72, unknown
209.8
2162
Male, age 80, both hemispheres
208.3
1980
Male, age 76, both hemispheres
196.3
2123
Female, age 91, both hemispheres
191.3
2788
Male, age 74, unknown
181.0
Medial parabrachial nucleus nTPM: 187.8
2170
Female, age 91, both hemispheres
197.8
2854
Male, age 80, both hemispheres
193.8
2786
Male, age 76, both hemispheres
187.6
2463
Female, age 85, right hemisphere
185.9
2156
Male, age 61, both hemispheres
173.8
Medial periolivary nuclei nTPM: 198.9
2171
Female, age 85, both hemispheres
224.3
2458
Female, age 91, both hemispheres
209.2
2063
Male, age 76, both hemispheres
202.9
2081
Male, age 80, both hemispheres
193.7
2791
Male, age 74, right hemisphere
164.4
Motor facial nucleus nTPM: 204.9
2327
Male, age 80, both hemispheres
234.6
2697
Female, age 85, both hemispheres
229.5
2062
Male, age 76, both hemispheres
213.3
2365
Male, age 74, right hemisphere
196.5
2795
Female, age 91, both hemispheres
178.7
2126
Male, age 61, both hemispheres
177.0
Motor trigeminal nucleus nTPM: 194.6
2321
Female, age 91, both hemispheres
212.9
2560
Male, age 74, both hemispheres
202.0
2079
Male, age 80, both hemispheres
196.3
2335
Male, age 61, both hemispheres
184.1
2309
Male, age 76, both hemispheres
177.6
Nuclei of the trapezoid body nTPM: 192.9
2735
Female, age 85, both hemispheres
205.4
2166
Male, age 80, both hemispheres
199.0
1983
Male, age 76, both hemispheres
193.2
2159
Male, age 61, both hemispheres
190.5
2368
Female, age 91, both hemispheres
176.7
Nucleus raphe magnus nTPM: 214.3
2172
Female, age 85, both hemispheres
250.5
2459
Female, age 91, both hemispheres
228.7
2328
Male, age 80, both hemispheres
223.0
2051
Male, age 76, both hemispheres
208.3
2455
Male, age 74, both hemispheres
194.9
2160
Male, age 61, both hemispheres
180.2
Paramedian reticular nucleus nTPM: 172.6
2050
Female, age 85, both hemispheres
205.2
2313
Male, age 61, both hemispheres
182.3
2057
Male, age 80, both hemispheres
174.7
2052
Male, age 76, both hemispheres
128.1
Pedunculopontine tegmental nucleus nTPM: 177.2
2334
Male, age 80, both hemispheres
205.9
1921
Female, age 85, both hemispheres
177.0
2338
Male, age 61, both hemispheres
148.7
Pontine nuclei nTPM: 202.9
2787
Female, age 85, both hemispheres
246.0
1968
Male, age 76, left hemisphere
219.3
1863
Male, age 55, unknown
209.1
2454
Male, age 74, left hemisphere
207.1
2319
Female, age 91, both hemispheres
204.9
2115
Male, age 80, left hemisphere
200.5
2109
Female, age 72, unknown
171.5
2727
Male, age 61, right hemisphere
164.9
Pontine raphe nucleus nTPM: 204.9
2853
Male, age 76, midline
205.1
2122
Female, age 85, midline
204.7
Posteroventral cochlear nucleus nTPM: 172.8
2070
Male, age 76, both hemispheres
208.5
2752
Female, age 85, both hemispheres
184.0
2135
Female, age 91, both hemispheres
169.3
2371
Male, age 61, both hemispheres
158.9
2341
Male, age 80, both hemispheres
143.3
Principal sensory trigeminal nucleus nTPM: 190.0
2367
Female, age 91, left hemisphere
218.7
2324
Male, age 76, both hemispheres
191.5
2158
Male, age 61, both hemispheres
175.4
2008
Male, age 80, left hemisphere
174.4
Reticular pontine nucleus, caudal nTPM: 214.2
2332
Male, age 80, right hemisphere
238.4
2457
Female, age 91, both hemispheres
230.3
2559
Male, age 74, both hemispheres
203.3
2092
Male, age 76, both hemispheres
184.7
Reticular pontine nucleus, oral nTPM: 215.2
2366
Female, age 91, both hemispheres
245.0
2167
Male, age 76, both hemispheres
212.1
2012
Female, age 85, both hemispheres
209.2
1939
Male, age 80, both hemispheres
205.5
2361
Male, age 74, both hemispheres
204.1
Reticulotegmental nucleus nTPM: 222.5
2452
Male, age 74, both hemispheres
231.3
2333
Male, age 80, both hemispheres
228.1
2322
Female, age 91, both hemispheres
227.5
2325
Male, age 76, both hemispheres
203.3
Spinal trigeminal nucleus, oral nTPM: 190.4
2164
Male, age 80, both hemispheres
208.9
1978
Male, age 76, both hemispheres
190.3
2737
Female, age 85, both hemispheres
171.8
Subcoeruleus area nTPM: 201.0
2369
Female, age 85, left hemisphere
212.7
2323
Female, age 91, left hemisphere
210.5
2089
Male, age 76, left hemisphere
204.9
1958
Male, age 80, both hemispheres
190.7
2451
Male, age 74, both hemispheres
186.2
Superior olive nTPM: 197.0
2329
Male, age 80, right hemisphere
217.8
2561
Female, age 91, both hemispheres
216.2
1875
Female, age 85, both hemispheres
210.1
2020
Male, age 76, both hemispheres
173.0
2364
Male, age 74, right hemisphere
167.6
Ventral periolivary nuclei nTPM: 192.8
2130
Female, age 85, both hemispheres
214.1
2165
Male, age 80, both hemispheres
210.9
2794
Female, age 91, left hemisphere
173.8
2023
Male, age 76, both hemispheres
172.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 203.1
2449
Male, age 74, both hemispheres
218.9
2840
Female, age 85, both hemispheres
215.1
2456
Female, age 91, both hemispheres
205.1
2359
Male, age 61, both hemispheres
195.3
2161
Male, age 80, both hemispheres
193.8
1959
Male, age 76, both hemispheres
190.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
