HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:75.8 nTPM
HPA Brain:106.2 nTPM
GTEx:75.8 nTPM
FANTOM5:55.0 Scaled Tags Per Million
Pig:63.3 nTPM
Mouse:26.4 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034739
Glial cells Medium
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.2
Sample id Sample description nTPM
Hippocampus
nTPM: 100.5
2621 Female, age 67, right hemisphere 105.1
2529 Female, age 94, left hemisphere 104.2
1911 Female, age 85, right hemisphere 100.0
1898 Male, age 80, left hemisphere 98.8
1855 Male, age 76, left hemisphere 98.0
2148 Female, age 91, left hemisphere 97.1
Dentate gyrus
nTPM: 101.3
2531 Female, age 67, both hemispheres 109.3
2010 Male, age 76, both hemispheres 108.6
2530 Female, age 94, left hemisphere 108.5
2528 Male, age 74, both hemispheres 94.3
2246 Female, age 85, both hemispheres 93.8
1927 Female, age 91, both hemispheres 93.4
Entorhinal gyrus
nTPM: 105.1
2613 Female, age 94, left hemisphere 115.0
2764 Male, age 80, right hemisphere 109.4
2117 Female, age 91, right hemisphere 104.8
1938 Female, age 85, left hemisphere 104.6
1787 Male, age 76, left hemisphere 99.1
2686 Male, age 75, right hemisphere 97.9
Hippocampus, CA1
nTPM: 99.4
2045 Male, age 76, both hemispheres 107.7
2749 Male, age 80, left hemisphere 107.5
1873 Female, age 85, both hemispheres 99.0
2527 Male, age 74, both hemispheres 92.4
2082 Female, age 91, right hemisphere 90.4
Hippocampus, CA2
nTPM: 92.4
2437 Female, age 94, left hemisphere 101.4
1963 Male, age 80, left hemisphere 96.0
2249 Male, age 74, both hemispheres 91.4
2113 Female, age 91, right hemisphere 91.2
1892 Male, age 76, both hemispheres 89.7
1940 Female, age 85, left hemisphere 84.5
Hippocampus, CA3
nTPM: 106.2
2620 Female, age 94, left hemisphere 138.5
2861 Female, age 67, both hemispheres 128.7
2137 Male, age 80, left hemisphere 99.5
1867 Male, age 76, both hemispheres 95.9
1891 Female, age 85, both hemispheres 93.0
2436 Male, age 74, both hemispheres 81.3
Parahippocampal cortex
nTPM: 96.2
2245 Female, age 91, both hemispheres 104.5
2018 Male, age 76, both hemispheres 103.7
2250 Female, age 67, right hemisphere 97.7
2692 Male, age 74, both hemispheres 97.2
2532 Female, age 72, left hemisphere 96.7
2622 Female, age 67, right hemisphere 95.9
1933 Female, age 85, both hemispheres 94.7
1990 Female, age 91, right hemisphere 92.6
1850 Male, age 80, both hemispheres 89.6
2693 Female, age 94, both hemispheres 89.2
Perirhinal gyrus
nTPM: 93.3
1794 Male, age 80, right hemisphere 102.7
1847 Female, age 91, left hemisphere 93.7
1841 Female, age 85, right hemisphere 90.2
2848 Male, age 76, right hemisphere 90.0
2521 Female, age 94, right hemisphere 89.9
Subiculum
nTPM: 96.0
2042 Male, age 76, both hemispheres 108.5
1901 Male, age 80, both hemispheres 97.5
1977 Female, age 85, both hemispheres 96.0
2729 Female, age 91, right hemisphere 92.3
2619 Male, age 74, both hemispheres 91.9
2438 Female, age 94, left hemisphere 90.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.8
Samples: 197

Max nTPM: 107.1
Min nTPM: 37.1
Std nTPM: 11.8
Median nTPM: 75.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 107.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 106.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 101.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 101.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 100.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 100.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 99.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 98.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 97.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 97.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 96.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.0
FF:10153-102I9 76 years, female 64.3
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.3
Pig sample Sample description nTPM
Subiculum
nTPM: 59.4
Samples: 4

Max nTPM: 73.4
Min nTPM: 52.1
Sample A Female 73.4
Sample B Female 54.7
Sample C Male 57.3
Sample D Male 52.1
Dorsal hippocampus
nTPM: 63.3
Samples: 4

Max nTPM: 77.0
Min nTPM: 51.7
Sample A Female 77.0
Sample B Female 61.6
Sample C Male 63.0
Sample D Male 51.7
Entorhinal cortex
nTPM: 55.5
Samples: 4

Max nTPM: 66.8
Min nTPM: 46.8
Sample A Female 66.8
Sample B Female 46.8
Sample C Male 55.3
Sample D Male 53.1
Ventral hippocampus
nTPM: 62.5
Samples: 4

Max nTPM: 76.7
Min nTPM: 45.8
Sample A Female 63.7
Sample B Female 45.8
Sample C Male 76.7
Sample D Male 63.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.2
Samples: 4

Max nTPM: 25.2
Min nTPM: 22.6
Sample A Male 25.2
Sample B Male 24.2
Sample C Female 22.6
Sample D Female 24.9
Hippocampal formation
nTPM: 26.4
Samples: 4

Max nTPM: 29.8
Min nTPM: 21.9
Sample A Male 21.9
Sample B Male 29.8
Sample C Female 27.3
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
69735747 Antisense, RP_050503_03_D12, Mouse strain C57BL/6J (56 days, male) 7.8

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