HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:59.3 nTPM
HPA Brain:132.0 nTPM
GTEx:59.3 nTPM
FANTOM5:97.0 Scaled Tags Per Million
Pig:61.5 nTPM
Mouse:48.9 nTPM
Allen mouse:18.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043940Antibody CAB034061Antibody CAB034065
Glial cells LowNot detectedNot detected
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 132.0
Sample id Sample description nTPM
Hippocampus
nTPM: 117.9
1911 Female, age 85, right hemisphere 138.1
1855 Male, age 76, left hemisphere 128.4
2529 Female, age 94, left hemisphere 122.6
2621 Female, age 67, right hemisphere 111.6
1898 Male, age 80, left hemisphere 109.5
2148 Female, age 91, left hemisphere 97.4
Dentate gyrus
nTPM: 124.2
2530 Female, age 94, left hemisphere 179.9
2010 Male, age 76, both hemispheres 146.2
1927 Female, age 91, both hemispheres 112.2
2246 Female, age 85, both hemispheres 110.2
2528 Male, age 74, both hemispheres 104.1
2531 Female, age 67, both hemispheres 92.8
Entorhinal gyrus
nTPM: 116.4
2764 Male, age 80, right hemisphere 126.3
2117 Female, age 91, right hemisphere 123.1
2686 Male, age 75, right hemisphere 119.1
1787 Male, age 76, left hemisphere 116.6
1938 Female, age 85, left hemisphere 112.7
2613 Female, age 94, left hemisphere 100.8
Hippocampus, CA1
nTPM: 122.1
2749 Male, age 80, left hemisphere 165.7
1873 Female, age 85, both hemispheres 131.7
2082 Female, age 91, right hemisphere 127.5
2527 Male, age 74, both hemispheres 110.7
2045 Male, age 76, both hemispheres 74.8
Hippocampus, CA2
nTPM: 132.0
1963 Male, age 80, left hemisphere 191.8
2437 Female, age 94, left hemisphere 138.4
1892 Male, age 76, both hemispheres 121.2
2113 Female, age 91, right hemisphere 120.7
2249 Male, age 74, both hemispheres 111.9
1940 Female, age 85, left hemisphere 108.0
Hippocampus, CA3
nTPM: 102.7
1891 Female, age 85, both hemispheres 135.5
2137 Male, age 80, left hemisphere 126.7
1867 Male, age 76, both hemispheres 100.7
2861 Female, age 67, both hemispheres 91.2
2436 Male, age 74, both hemispheres 89.9
2620 Female, age 94, left hemisphere 72.1
Parahippocampal cortex
nTPM: 112.9
2018 Male, age 76, both hemispheres 141.6
2532 Female, age 72, left hemisphere 121.3
1990 Female, age 91, right hemisphere 119.4
1850 Male, age 80, both hemispheres 118.6
1933 Female, age 85, both hemispheres 117.7
2245 Female, age 91, both hemispheres 116.7
2693 Female, age 94, both hemispheres 114.1
2692 Male, age 74, both hemispheres 113.4
2622 Female, age 67, right hemisphere 83.5
2250 Female, age 67, right hemisphere 82.5
Perirhinal gyrus
nTPM: 104.3
2848 Male, age 76, right hemisphere 117.3
2521 Female, age 94, right hemisphere 105.9
1794 Male, age 80, right hemisphere 102.0
1841 Female, age 85, right hemisphere 100.3
1847 Female, age 91, left hemisphere 95.8
Subiculum
nTPM: 129.3
2042 Male, age 76, both hemispheres 179.9
1901 Male, age 80, both hemispheres 148.2
1977 Female, age 85, both hemispheres 127.4
2619 Male, age 74, both hemispheres 111.7
2438 Female, age 94, left hemisphere 108.5
2729 Female, age 91, right hemisphere 99.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.3
Samples: 197

Max nTPM: 162.0
Min nTPM: 19.2
Std nTPM: 23.9
Median nTPM: 53.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 162.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 157.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 149.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 144.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 138.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 134.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 116.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 109.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 109.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 103.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 102.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.0
FF:10153-102I9 76 years, female 108.9
FF:10169-103B7 60 years, female 85.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.5
Pig sample Sample description nTPM
Subiculum
nTPM: 49.4
Samples: 4

Max nTPM: 54.2
Min nTPM: 44.7
Sample A Female 54.2
Sample B Female 44.7
Sample C Male 52.9
Sample D Male 45.6
Dorsal hippocampus
nTPM: 49.5
Samples: 4

Max nTPM: 59.0
Min nTPM: 38.1
Sample A Female 59.0
Sample B Female 52.1
Sample C Male 48.6
Sample D Male 38.1
Entorhinal cortex
nTPM: 61.5
Samples: 4

Max nTPM: 74.0
Min nTPM: 54.8
Sample A Female 55.5
Sample B Female 74.0
Sample C Male 61.7
Sample D Male 54.8
Ventral hippocampus
nTPM: 57.8
Samples: 4

Max nTPM: 73.7
Min nTPM: 43.1
Sample A Female 65.0
Sample B Female 43.1
Sample C Male 73.7
Sample D Male 49.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 36.9
Min nTPM: 20.4
Sample A Male 25.5
Sample B Male 20.4
Sample C Female 32.7
Sample D Female 36.9
Hippocampal formation
nTPM: 48.9
Samples: 4

Max nTPM: 59.9
Min nTPM: 39.5
Sample A Male 39.5
Sample B Male 54.2
Sample C Female 59.9
Sample D Female 42.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.9
69059943 Antisense, RP_050317_04_F03, Mouse strain C57BL/6J (56 days, male) 18.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org