HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.1 nTPM
HPA Brain:32.2 nTPM
GTEx:27.1 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:80.8 nTPM
Mouse:112.8 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047108Antibody HPA050628
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.2
Sample id Sample description nTPM
Hippocampus
nTPM: 24.9
2621 Female, age 67, right hemisphere 28.7
1898 Male, age 80, left hemisphere 26.4
1855 Male, age 76, left hemisphere 25.5
2148 Female, age 91, left hemisphere 24.4
2529 Female, age 94, left hemisphere 23.6
1911 Female, age 85, right hemisphere 20.6
Dentate gyrus
nTPM: 24.5
2246 Female, age 85, both hemispheres 26.5
2531 Female, age 67, both hemispheres 25.1
1927 Female, age 91, both hemispheres 24.6
2530 Female, age 94, left hemisphere 24.0
2528 Male, age 74, both hemispheres 23.9
2010 Male, age 76, both hemispheres 23.2
Entorhinal gyrus
nTPM: 27.7
1938 Female, age 85, left hemisphere 29.8
1787 Male, age 76, left hemisphere 29.0
2764 Male, age 80, right hemisphere 29.0
2613 Female, age 94, left hemisphere 28.9
2686 Male, age 75, right hemisphere 26.0
2117 Female, age 91, right hemisphere 23.8
Hippocampus, CA1
nTPM: 26.4
2749 Male, age 80, left hemisphere 30.4
1873 Female, age 85, both hemispheres 25.9
2045 Male, age 76, both hemispheres 25.9
2527 Male, age 74, both hemispheres 25.2
2082 Female, age 91, right hemisphere 24.6
Hippocampus, CA2
nTPM: 25.0
1892 Male, age 76, both hemispheres 28.6
2249 Male, age 74, both hemispheres 25.9
1940 Female, age 85, left hemisphere 24.4
1963 Male, age 80, left hemisphere 24.0
2113 Female, age 91, right hemisphere 23.7
2437 Female, age 94, left hemisphere 23.4
Hippocampus, CA3
nTPM: 27.9
2436 Male, age 74, both hemispheres 33.0
2620 Female, age 94, left hemisphere 30.7
1867 Male, age 76, both hemispheres 27.5
2137 Male, age 80, left hemisphere 27.4
2861 Female, age 67, both hemispheres 25.2
1891 Female, age 85, both hemispheres 23.3
Parahippocampal cortex
nTPM: 27.3
1850 Male, age 80, both hemispheres 34.3
2532 Female, age 72, left hemisphere 30.2
2622 Female, age 67, right hemisphere 28.9
2245 Female, age 91, both hemispheres 28.2
1990 Female, age 91, right hemisphere 27.1
1933 Female, age 85, both hemispheres 26.1
2692 Male, age 74, both hemispheres 25.9
2693 Female, age 94, both hemispheres 25.6
2018 Male, age 76, both hemispheres 23.9
2250 Female, age 67, right hemisphere 22.7
Perirhinal gyrus
nTPM: 32.2
1794 Male, age 80, right hemisphere 36.2
1847 Female, age 91, left hemisphere 35.4
1841 Female, age 85, right hemisphere 31.6
2848 Male, age 76, right hemisphere 31.3
2521 Female, age 94, right hemisphere 26.5
Subiculum
nTPM: 24.4
1977 Female, age 85, both hemispheres 28.2
2619 Male, age 74, both hemispheres 25.4
1901 Male, age 80, both hemispheres 24.7
2438 Female, age 94, left hemisphere 24.2
2042 Male, age 76, both hemispheres 22.3
2729 Female, age 91, right hemisphere 21.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.1
Samples: 197

Max nTPM: 49.1
Min nTPM: 13.5
Std nTPM: 5.1
Median nTPM: 26.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 49.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 46.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 41.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 40.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 38.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 37.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 36.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 35.7
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 35.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.8
FF:10153-102I9 76 years, female 67.4
FF:10169-103B7 60 years, female 60.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.8
Pig sample Sample description nTPM
Subiculum
nTPM: 79.5
Samples: 4

Max nTPM: 96.3
Min nTPM: 72.4
Sample A Female 96.3
Sample B Female 72.4
Sample C Male 76.8
Sample D Male 72.6
Dorsal hippocampus
nTPM: 80.8
Samples: 4

Max nTPM: 99.0
Min nTPM: 64.5
Sample A Female 99.0
Sample B Female 76.6
Sample C Male 83.1
Sample D Male 64.5
Entorhinal cortex
nTPM: 77.1
Samples: 4

Max nTPM: 87.0
Min nTPM: 65.2
Sample A Female 87.0
Sample B Female 75.2
Sample C Male 80.8
Sample D Male 65.2
Ventral hippocampus
nTPM: 76.5
Samples: 4

Max nTPM: 90.6
Min nTPM: 56.6
Sample A Female 76.1
Sample B Female 56.6
Sample C Male 90.6
Sample D Male 82.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.5
Samples: 4

Max nTPM: 114.5
Min nTPM: 102.4
Sample A Male 102.4
Sample B Male 112.2
Sample C Female 112.7
Sample D Female 114.5
Hippocampal formation
nTPM: 112.8
Samples: 4

Max nTPM: 124.0
Min nTPM: 105.4
Sample A Male 124.0
Sample B Male 105.4
Sample C Female 111.6
Sample D Female 110.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
69782413 Antisense, RP_050505_02_H12, Mouse strain C57BL/6J (56 days, male) 8.8

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