HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.9 nTPM
HPA Brain:27.2 nTPM
GTEx:19.9 nTPM
FANTOM5:68.0 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:13.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.2
Sample id Sample description nTPM
Hippocampus
nTPM: 22.5
2529 Female, age 94, left hemisphere 26.6
2621 Female, age 67, right hemisphere 25.4
1911 Female, age 85, right hemisphere 23.4
2148 Female, age 91, left hemisphere 21.7
1855 Male, age 76, left hemisphere 19.7
1898 Male, age 80, left hemisphere 18.0
Dentate gyrus
nTPM: 22.5
2531 Female, age 67, both hemispheres 25.2
2530 Female, age 94, left hemisphere 24.8
2528 Male, age 74, both hemispheres 22.6
2246 Female, age 85, both hemispheres 22.4
2010 Male, age 76, both hemispheres 20.7
1927 Female, age 91, both hemispheres 19.4
Entorhinal gyrus
nTPM: 26.6
2686 Male, age 75, right hemisphere 29.4
2764 Male, age 80, right hemisphere 28.5
2613 Female, age 94, left hemisphere 28.2
2117 Female, age 91, right hemisphere 26.9
1938 Female, age 85, left hemisphere 25.3
1787 Male, age 76, left hemisphere 21.6
Hippocampus, CA1
nTPM: 20.6
2082 Female, age 91, right hemisphere 24.1
2527 Male, age 74, both hemispheres 22.7
1873 Female, age 85, both hemispheres 19.8
2045 Male, age 76, both hemispheres 19.2
2749 Male, age 80, left hemisphere 17.1
Hippocampus, CA2
nTPM: 23.1
2437 Female, age 94, left hemisphere 24.9
1940 Female, age 85, left hemisphere 24.1
2113 Female, age 91, right hemisphere 23.8
2249 Male, age 74, both hemispheres 23.1
1963 Male, age 80, left hemisphere 22.4
1892 Male, age 76, both hemispheres 20.2
Hippocampus, CA3
nTPM: 20.2
1891 Female, age 85, both hemispheres 26.8
2436 Male, age 74, both hemispheres 21.7
1867 Male, age 76, both hemispheres 20.3
2861 Female, age 67, both hemispheres 18.5
2620 Female, age 94, left hemisphere 17.6
2137 Male, age 80, left hemisphere 16.2
Parahippocampal cortex
nTPM: 26.6
2532 Female, age 72, left hemisphere 30.4
2692 Male, age 74, both hemispheres 30.4
1850 Male, age 80, both hemispheres 27.9
2693 Female, age 94, both hemispheres 27.8
2622 Female, age 67, right hemisphere 27.2
1933 Female, age 85, both hemispheres 26.5
1990 Female, age 91, right hemisphere 26.0
2018 Male, age 76, both hemispheres 24.9
2245 Female, age 91, both hemispheres 24.7
2250 Female, age 67, right hemisphere 20.4
Perirhinal gyrus
nTPM: 23.6
1841 Female, age 85, right hemisphere 26.4
2848 Male, age 76, right hemisphere 25.0
1847 Female, age 91, left hemisphere 22.9
2521 Female, age 94, right hemisphere 22.1
1794 Male, age 80, right hemisphere 21.7
Subiculum
nTPM: 27.2
2438 Female, age 94, left hemisphere 31.3
2042 Male, age 76, both hemispheres 28.5
1977 Female, age 85, both hemispheres 27.8
2619 Male, age 74, both hemispheres 27.1
1901 Male, age 80, both hemispheres 25.7
2729 Female, age 91, right hemisphere 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.9
Samples: 197

Max nTPM: 42.9
Min nTPM: 9.7
Std nTPM: 5.4
Median nTPM: 19.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 39.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 35.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 33.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 33.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 32.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 31.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 31.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 31.0
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.0
FF:10169-103B7 60 years, female 70.6
FF:10153-102I9 76 years, female 65.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.6
Pig sample Sample description nTPM
Subiculum
nTPM: 23.4
Samples: 4

Max nTPM: 27.2
Min nTPM: 21.3
Sample A Female 27.2
Sample B Female 23.2
Sample C Male 21.9
Sample D Male 21.3
Dorsal hippocampus
nTPM: 28.6
Samples: 4

Max nTPM: 33.5
Min nTPM: 25.8
Sample A Female 33.5
Sample B Female 27.5
Sample C Male 27.7
Sample D Male 25.8
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 24.0
Min nTPM: 21.3
Sample A Female 24.0
Sample B Female 23.4
Sample C Male 22.5
Sample D Male 21.3
Ventral hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 28.9
Min nTPM: 21.3
Sample A Female 28.1
Sample B Female 21.3
Sample C Male 28.3
Sample D Male 28.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.5
Sample A Male 11.9
Sample B Male 11.0
Sample C Female 11.1
Sample D Female 8.5
Hippocampal formation
nTPM: 13.2
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.8
Sample A Male 15.6
Sample B Male 10.8
Sample C Female 14.1
Sample D Female 12.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70295882 Antisense, RP_050531_04_B04, Mouse strain C57BL/6J (56 days, male) 0.2

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