HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:13.4 nTPM
HPA Brain:63.9 nTPM
GTEx:13.4 nTPM
FANTOM5:70.2 Scaled Tags Per Million
Pig:42.4 nTPM
Mouse:70.9 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026874Antibody HPA061426
Glial cells Not detectedLow
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.9
Sample id Sample description nTPM
Hippocampus
nTPM: 60.2
1898 Male, age 80, left hemisphere 66.5
2529 Female, age 94, left hemisphere 64.9
1855 Male, age 76, left hemisphere 60.3
2148 Female, age 91, left hemisphere 56.9
2621 Female, age 67, right hemisphere 56.7
1911 Female, age 85, right hemisphere 56.2
Dentate gyrus
nTPM: 60.1
2530 Female, age 94, left hemisphere 65.8
2010 Male, age 76, both hemispheres 64.8
2528 Male, age 74, both hemispheres 62.5
1927 Female, age 91, both hemispheres 62.0
2246 Female, age 85, both hemispheres 56.2
2531 Female, age 67, both hemispheres 49.4
Entorhinal gyrus
nTPM: 57.9
2117 Female, age 91, right hemisphere 65.5
1938 Female, age 85, left hemisphere 60.9
1787 Male, age 76, left hemisphere 60.3
2764 Male, age 80, right hemisphere 59.9
2613 Female, age 94, left hemisphere 55.2
2686 Male, age 75, right hemisphere 45.7
Hippocampus, CA1
nTPM: 60.7
2749 Male, age 80, left hemisphere 65.8
1873 Female, age 85, both hemispheres 61.8
2082 Female, age 91, right hemisphere 60.9
2527 Male, age 74, both hemispheres 59.4
2045 Male, age 76, both hemispheres 55.5
Hippocampus, CA2
nTPM: 63.9
1892 Male, age 76, both hemispheres 69.8
2249 Male, age 74, both hemispheres 69.2
1963 Male, age 80, left hemisphere 63.5
1940 Female, age 85, left hemisphere 61.0
2113 Female, age 91, right hemisphere 60.0
2437 Female, age 94, left hemisphere 60.0
Hippocampus, CA3
nTPM: 59.7
2436 Male, age 74, both hemispheres 68.0
1867 Male, age 76, both hemispheres 61.9
1891 Female, age 85, both hemispheres 61.5
2620 Female, age 94, left hemisphere 58.5
2137 Male, age 80, left hemisphere 57.0
2861 Female, age 67, both hemispheres 51.4
Parahippocampal cortex
nTPM: 55.6
2250 Female, age 67, right hemisphere 61.1
1990 Female, age 91, right hemisphere 60.6
1850 Male, age 80, both hemispheres 60.3
1933 Female, age 85, both hemispheres 60.0
2532 Female, age 72, left hemisphere 59.9
2245 Female, age 91, both hemispheres 54.9
2018 Male, age 76, both hemispheres 54.5
2692 Male, age 74, both hemispheres 53.8
2693 Female, age 94, both hemispheres 48.2
2622 Female, age 67, right hemisphere 42.7
Perirhinal gyrus
nTPM: 59.0
1847 Female, age 91, left hemisphere 64.8
1794 Male, age 80, right hemisphere 63.1
1841 Female, age 85, right hemisphere 59.6
2521 Female, age 94, right hemisphere 55.7
2848 Male, age 76, right hemisphere 52.1
Subiculum
nTPM: 59.6
2619 Male, age 74, both hemispheres 61.9
1901 Male, age 80, both hemispheres 61.5
1977 Female, age 85, both hemispheres 61.5
2042 Male, age 76, both hemispheres 61.0
2729 Female, age 91, right hemisphere 57.6
2438 Female, age 94, left hemisphere 54.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.4
Samples: 197

Max nTPM: 36.5
Min nTPM: 0.7
Std nTPM: 5.4
Median nTPM: 13.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 36.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 26.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 24.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 24.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 23.5
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 23.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 22.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 22.7
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 22.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.2
FF:10153-102I9 76 years, female 82.3
FF:10169-103B7 60 years, female 58.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.4
Pig sample Sample description nTPM
Subiculum
nTPM: 37.3
Samples: 4

Max nTPM: 44.3
Min nTPM: 33.8
Sample A Female 44.3
Sample B Female 34.4
Sample C Male 36.7
Sample D Male 33.8
Dorsal hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 32.0
Sample A Female 51.6
Sample B Female 44.5
Sample C Male 41.6
Sample D Male 32.0
Entorhinal cortex
nTPM: 35.4
Samples: 4

Max nTPM: 40.1
Min nTPM: 30.8
Sample A Female 40.1
Sample B Female 33.8
Sample C Male 36.7
Sample D Male 30.8
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 53.0
Min nTPM: 28.7
Sample A Female 40.7
Sample B Female 28.7
Sample C Male 53.0
Sample D Male 44.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.2
Samples: 4

Max nTPM: 70.4
Min nTPM: 57.1
Sample A Male 59.9
Sample B Male 57.1
Sample C Female 65.3
Sample D Female 70.4
Hippocampal formation
nTPM: 70.9
Samples: 4

Max nTPM: 78.8
Min nTPM: 64.1
Sample A Male 64.1
Sample B Male 69.9
Sample C Female 78.8
Sample D Female 70.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
69672778 Antisense, RP_050428_04_E01, Mouse strain C57BL/6J (56 days, male) 8.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org