HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:19.0 nTPM
HPA Brain:32.1 nTPM
GTEx:19.0 nTPM
FANTOM5:9.3 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:12.3 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB015194
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.1
Sample id Sample description nTPM
Hippocampus
nTPM: 25.8
2621 Female, age 67, right hemisphere 33.0
1911 Female, age 85, right hemisphere 25.5
2529 Female, age 94, left hemisphere 25.5
1898 Male, age 80, left hemisphere 24.6
2148 Female, age 91, left hemisphere 24.4
1855 Male, age 76, left hemisphere 21.7
Dentate gyrus
nTPM: 25.2
2531 Female, age 67, both hemispheres 39.1
2246 Female, age 85, both hemispheres 26.9
1927 Female, age 91, both hemispheres 24.2
2528 Male, age 74, both hemispheres 23.0
2010 Male, age 76, both hemispheres 21.9
2530 Female, age 94, left hemisphere 16.4
Entorhinal gyrus
nTPM: 32.1
2613 Female, age 94, left hemisphere 55.2
2764 Male, age 80, right hemisphere 33.3
2686 Male, age 75, right hemisphere 29.6
1938 Female, age 85, left hemisphere 26.8
1787 Male, age 76, left hemisphere 25.0
2117 Female, age 91, right hemisphere 22.9
Hippocampus, CA1
nTPM: 27.7
2082 Female, age 91, right hemisphere 33.3
2045 Male, age 76, both hemispheres 28.5
1873 Female, age 85, both hemispheres 27.8
2527 Male, age 74, both hemispheres 24.7
2749 Male, age 80, left hemisphere 23.9
Hippocampus, CA2
nTPM: 29.0
1940 Female, age 85, left hemisphere 38.0
2437 Female, age 94, left hemisphere 33.3
1963 Male, age 80, left hemisphere 29.9
2113 Female, age 91, right hemisphere 27.1
2249 Male, age 74, both hemispheres 26.7
1892 Male, age 76, both hemispheres 18.8
Hippocampus, CA3
nTPM: 29.5
2620 Female, age 94, left hemisphere 39.3
2861 Female, age 67, both hemispheres 34.9
2137 Male, age 80, left hemisphere 34.0
2436 Male, age 74, both hemispheres 23.7
1891 Female, age 85, both hemispheres 23.3
1867 Male, age 76, both hemispheres 21.9
Parahippocampal cortex
nTPM: 27.4
2693 Female, age 94, both hemispheres 32.6
1933 Female, age 85, both hemispheres 32.1
2622 Female, age 67, right hemisphere 30.7
2245 Female, age 91, both hemispheres 29.7
2250 Female, age 67, right hemisphere 27.2
2532 Female, age 72, left hemisphere 27.1
1990 Female, age 91, right hemisphere 26.3
1850 Male, age 80, both hemispheres 25.4
2018 Male, age 76, both hemispheres 22.4
2692 Male, age 74, both hemispheres 20.6
Perirhinal gyrus
nTPM: 31.4
2521 Female, age 94, right hemisphere 37.2
1847 Female, age 91, left hemisphere 34.6
1841 Female, age 85, right hemisphere 29.0
1794 Male, age 80, right hemisphere 28.2
2848 Male, age 76, right hemisphere 28.0
Subiculum
nTPM: 27.3
2438 Female, age 94, left hemisphere 32.8
1977 Female, age 85, both hemispheres 28.0
2619 Male, age 74, both hemispheres 28.0
1901 Male, age 80, both hemispheres 26.5
2042 Male, age 76, both hemispheres 26.4
2729 Female, age 91, right hemisphere 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 50.1
Min nTPM: 3.8
Std nTPM: 7.6
Median nTPM: 18.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 50.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 45.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 39.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 38.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 36.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 36.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 36.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 34.4
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 34.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 32.1
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 31.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.3
FF:10153-102I9 76 years, female 12.3
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Subiculum
nTPM: 20.4
Samples: 4

Max nTPM: 25.1
Min nTPM: 12.4
Sample A Female 21.5
Sample B Female 12.4
Sample C Male 22.6
Sample D Male 25.1
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.0
Sample A Female 21.7
Sample B Female 17.3
Sample C Male 20.8
Sample D Male 15.0
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 27.7
Min nTPM: 14.7
Sample A Female 27.7
Sample B Female 18.9
Sample C Male 22.7
Sample D Male 14.7
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 34.8
Min nTPM: 14.6
Sample A Female 17.0
Sample B Female 14.6
Sample C Male 34.8
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.0
Sample A Male 13.0
Sample B Male 11.0
Sample C Female 11.3
Sample D Female 13.8
Hippocampal formation
nTPM: 10.2
Samples: 4

Max nTPM: 12.5
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 12.5
Sample C Female 9.0
Sample D Female 11.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
76085748 Antisense, RP_060620_02_A08, Mouse strain C57BL/6J (56 days, male) 3.6
69736316 Antisense, RP_050503_04_E08, Mouse strain C57BL/6J (56 days, male) 2.2

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