HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:276.4 nTPM
HPA Brain:136.5 nTPM
GTEx:276.4 nTPM
FANTOM5:53.4 Scaled Tags Per Million
Pig:35.4 nTPM
Mouse:85.9 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051377
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.5
Sample id Sample description nTPM
Hippocampus
nTPM: 122.2
1898 Male, age 80, left hemisphere 173.8
2529 Female, age 94, left hemisphere 125.2
2148 Female, age 91, left hemisphere 112.8
2621 Female, age 67, right hemisphere 110.3
1911 Female, age 85, right hemisphere 109.7
1855 Male, age 76, left hemisphere 101.5
Dentate gyrus
nTPM: 115.1
2010 Male, age 76, both hemispheres 148.6
2530 Female, age 94, left hemisphere 129.1
1927 Female, age 91, both hemispheres 123.3
2528 Male, age 74, both hemispheres 109.7
2246 Female, age 85, both hemispheres 93.4
2531 Female, age 67, both hemispheres 86.8
Entorhinal gyrus
nTPM: 122.5
2764 Male, age 80, right hemisphere 135.9
1938 Female, age 85, left hemisphere 132.5
2686 Male, age 75, right hemisphere 127.4
2117 Female, age 91, right hemisphere 122.3
1787 Male, age 76, left hemisphere 119.6
2613 Female, age 94, left hemisphere 97.4
Hippocampus, CA1
nTPM: 130.0
2749 Male, age 80, left hemisphere 191.1
1873 Female, age 85, both hemispheres 118.6
2527 Male, age 74, both hemispheres 114.2
2045 Male, age 76, both hemispheres 113.5
2082 Female, age 91, right hemisphere 112.7
Hippocampus, CA2
nTPM: 136.5
1892 Male, age 76, both hemispheres 175.5
1963 Male, age 80, left hemisphere 165.6
2249 Male, age 74, both hemispheres 137.8
1940 Female, age 85, left hemisphere 126.5
2437 Female, age 94, left hemisphere 116.3
2113 Female, age 91, right hemisphere 97.4
Hippocampus, CA3
nTPM: 123.0
1867 Male, age 76, both hemispheres 170.5
2137 Male, age 80, left hemisphere 130.9
2436 Male, age 74, both hemispheres 130.7
1891 Female, age 85, both hemispheres 117.9
2861 Female, age 67, both hemispheres 96.1
2620 Female, age 94, left hemisphere 91.8
Parahippocampal cortex
nTPM: 115.5
2018 Male, age 76, both hemispheres 142.8
1850 Male, age 80, both hemispheres 131.2
1990 Female, age 91, right hemisphere 127.1
1933 Female, age 85, both hemispheres 125.4
2250 Female, age 67, right hemisphere 116.6
2245 Female, age 91, both hemispheres 112.8
2693 Female, age 94, both hemispheres 104.5
2692 Male, age 74, both hemispheres 102.8
2532 Female, age 72, left hemisphere 96.3
2622 Female, age 67, right hemisphere 95.4
Perirhinal gyrus
nTPM: 126.2
1847 Female, age 91, left hemisphere 145.5
1794 Male, age 80, right hemisphere 139.4
1841 Female, age 85, right hemisphere 131.7
2521 Female, age 94, right hemisphere 107.8
2848 Male, age 76, right hemisphere 106.8
Subiculum
nTPM: 111.3
1901 Male, age 80, both hemispheres 132.6
1977 Female, age 85, both hemispheres 125.0
2042 Male, age 76, both hemispheres 120.7
2729 Female, age 91, right hemisphere 105.4
2619 Male, age 74, both hemispheres 103.1
2438 Female, age 94, left hemisphere 80.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 276.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 276.4
Samples: 197

Max nTPM: 911.5
Min nTPM: 140.2
Std nTPM: 89.7
Median nTPM: 263.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 911.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 636.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 608.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 546.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 460.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 459.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 457.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 448.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 431.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 415.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 412.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.4
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 46.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.4
Pig sample Sample description nTPM
Subiculum
nTPM: 31.2
Samples: 4

Max nTPM: 34.7
Min nTPM: 26.1
Sample A Female 26.1
Sample B Female 34.7
Sample C Male 30.4
Sample D Male 33.6
Dorsal hippocampus
nTPM: 33.3
Samples: 4

Max nTPM: 36.9
Min nTPM: 31.7
Sample A Female 31.9
Sample B Female 31.7
Sample C Male 32.5
Sample D Male 36.9
Entorhinal cortex
nTPM: 35.5
Samples: 4

Max nTPM: 38.6
Min nTPM: 32.7
Sample A Female 33.8
Sample B Female 36.7
Sample C Male 32.7
Sample D Male 38.6
Ventral hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 37.3
Min nTPM: 28.1
Sample A Female 35.7
Sample B Female 37.3
Sample C Male 28.1
Sample D Male 31.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.1
Samples: 4

Max nTPM: 92.4
Min nTPM: 76.4
Sample A Male 82.0
Sample B Male 92.4
Sample C Female 81.4
Sample D Female 76.4
Hippocampal formation
nTPM: 85.9
Samples: 4

Max nTPM: 95.6
Min nTPM: 76.6
Sample A Male 87.4
Sample B Male 84.0
Sample C Female 76.6
Sample D Female 95.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
70429309 Antisense, RP_050614_01_D09, Mouse strain C57BL/6J (56 days, male) 1.2

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