HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:38.3 nTPM
HPA Brain:57.9 nTPM
GTEx:38.3 nTPM
FANTOM5:54.3 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:17.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027301Antibody HPA056496
Glial cells MediumMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.9
Sample id Sample description nTPM
Hippocampus
nTPM: 54.3
1898 Male, age 80, left hemisphere 60.3
2529 Female, age 94, left hemisphere 57.9
2621 Female, age 67, right hemisphere 55.7
1855 Male, age 76, left hemisphere 54.6
2148 Female, age 91, left hemisphere 49.7
1911 Female, age 85, right hemisphere 47.8
Dentate gyrus
nTPM: 57.3
2010 Male, age 76, both hemispheres 69.5
2530 Female, age 94, left hemisphere 68.2
2531 Female, age 67, both hemispheres 59.7
1927 Female, age 91, both hemispheres 53.9
2528 Male, age 74, both hemispheres 46.2
2246 Female, age 85, both hemispheres 46.0
Entorhinal gyrus
nTPM: 51.3
2117 Female, age 91, right hemisphere 56.1
2613 Female, age 94, left hemisphere 52.8
2686 Male, age 75, right hemisphere 50.5
2764 Male, age 80, right hemisphere 50.1
1938 Female, age 85, left hemisphere 50.0
1787 Male, age 76, left hemisphere 48.4
Hippocampus, CA1
nTPM: 55.5
2749 Male, age 80, left hemisphere 63.3
1873 Female, age 85, both hemispheres 55.6
2045 Male, age 76, both hemispheres 54.8
2082 Female, age 91, right hemisphere 53.8
2527 Male, age 74, both hemispheres 49.9
Hippocampus, CA2
nTPM: 57.9
1963 Male, age 80, left hemisphere 80.5
2437 Female, age 94, left hemisphere 57.4
1940 Female, age 85, left hemisphere 57.0
2113 Female, age 91, right hemisphere 55.9
1892 Male, age 76, both hemispheres 51.4
2249 Male, age 74, both hemispheres 45.0
Hippocampus, CA3
nTPM: 54.2
2861 Female, age 67, both hemispheres 63.4
2137 Male, age 80, left hemisphere 61.6
1867 Male, age 76, both hemispheres 54.8
2436 Male, age 74, both hemispheres 50.6
2620 Female, age 94, left hemisphere 48.4
1891 Female, age 85, both hemispheres 46.6
Parahippocampal cortex
nTPM: 50.5
2018 Male, age 76, both hemispheres 73.7
2250 Female, age 67, right hemisphere 59.6
2245 Female, age 91, both hemispheres 59.5
1990 Female, age 91, right hemisphere 49.5
2532 Female, age 72, left hemisphere 47.9
2693 Female, age 94, both hemispheres 45.9
1933 Female, age 85, both hemispheres 44.1
2622 Female, age 67, right hemisphere 42.9
1850 Male, age 80, both hemispheres 41.2
2692 Male, age 74, both hemispheres 40.6
Perirhinal gyrus
nTPM: 46.8
2521 Female, age 94, right hemisphere 57.8
1847 Female, age 91, left hemisphere 46.8
1794 Male, age 80, right hemisphere 45.7
2848 Male, age 76, right hemisphere 42.7
1841 Female, age 85, right hemisphere 41.1
Subiculum
nTPM: 56.0
2042 Male, age 76, both hemispheres 71.6
1901 Male, age 80, both hemispheres 58.2
2729 Female, age 91, right hemisphere 56.7
2438 Female, age 94, left hemisphere 55.2
1977 Female, age 85, both hemispheres 48.5
2619 Male, age 74, both hemispheres 46.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.3
Samples: 197

Max nTPM: 90.5
Min nTPM: 23.4
Std nTPM: 8.6
Median nTPM: 36.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 90.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 75.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 72.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 63.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 59.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 56.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 53.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 53.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 52.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.3
FF:10153-102I9 76 years, female 54.6
FF:10169-103B7 60 years, female 54.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 22.4
Min nTPM: 17.2
Sample A Female 22.4
Sample B Female 18.0
Sample C Male 21.1
Sample D Male 17.2
Dorsal hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 18.3
Sample A Female 21.2
Sample B Female 18.3
Sample C Male 19.1
Sample D Male 19.9
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.7
Min nTPM: 18.0
Sample A Female 21.4
Sample B Female 20.4
Sample C Male 22.7
Sample D Male 18.0
Ventral hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 18.1
Sample A Female 19.1
Sample B Female 18.1
Sample C Male 22.4
Sample D Male 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 17.9
Min nTPM: 16.0
Sample A Male 17.6
Sample B Male 16.0
Sample C Female 17.9
Sample D Female 17.5
Hippocampal formation
nTPM: 17.4
Samples: 4

Max nTPM: 17.9
Min nTPM: 16.7
Sample A Male 16.7
Sample B Male 17.9
Sample C Female 17.5
Sample D Female 17.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68300896 Antisense, RP_041129_02_D03, Mouse strain C57BL/6J (56 days, male) 0.1

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