HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:2.2 nTPM
HPA Brain:61.0 nTPM
GTEx:2.2 nTPM
FANTOM5:76.8 Scaled Tags Per Million
Pig:54.8 nTPM
Mouse:65.4 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051057
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.0
Sample id Sample description nTPM
Hippocampus
nTPM: 51.6
1898 Male, age 80, left hemisphere 67.4
2621 Female, age 67, right hemisphere 54.4
1855 Male, age 76, left hemisphere 53.9
2148 Female, age 91, left hemisphere 48.9
1911 Female, age 85, right hemisphere 48.1
2529 Female, age 94, left hemisphere 36.9
Dentate gyrus
nTPM: 53.0
1927 Female, age 91, both hemispheres 72.2
2010 Male, age 76, both hemispheres 55.3
2530 Female, age 94, left hemisphere 52.7
2246 Female, age 85, both hemispheres 49.9
2531 Female, age 67, both hemispheres 44.5
2528 Male, age 74, both hemispheres 43.6
Entorhinal gyrus
nTPM: 48.5
1938 Female, age 85, left hemisphere 54.0
2764 Male, age 80, right hemisphere 53.9
2613 Female, age 94, left hemisphere 53.2
1787 Male, age 76, left hemisphere 48.5
2117 Female, age 91, right hemisphere 44.4
2686 Male, age 75, right hemisphere 36.6
Hippocampus, CA1
nTPM: 61.0
2749 Male, age 80, left hemisphere 100.0
1873 Female, age 85, both hemispheres 58.6
2045 Male, age 76, both hemispheres 54.7
2527 Male, age 74, both hemispheres 49.9
2082 Female, age 91, right hemisphere 41.5
Hippocampus, CA2
nTPM: 54.4
1892 Male, age 76, both hemispheres 75.8
1963 Male, age 80, left hemisphere 70.6
2249 Male, age 74, both hemispheres 47.9
2437 Female, age 94, left hemisphere 46.0
2113 Female, age 91, right hemisphere 44.2
1940 Female, age 85, left hemisphere 41.7
Hippocampus, CA3
nTPM: 59.2
2137 Male, age 80, left hemisphere 83.7
1867 Male, age 76, both hemispheres 63.2
2620 Female, age 94, left hemisphere 60.5
2436 Male, age 74, both hemispheres 53.8
1891 Female, age 85, both hemispheres 49.2
2861 Female, age 67, both hemispheres 44.6
Parahippocampal cortex
nTPM: 49.7
1850 Male, age 80, both hemispheres 64.2
2245 Female, age 91, both hemispheres 54.9
1990 Female, age 91, right hemisphere 54.7
2532 Female, age 72, left hemisphere 53.5
1933 Female, age 85, both hemispheres 50.2
2693 Female, age 94, both hemispheres 49.2
2250 Female, age 67, right hemisphere 46.5
2018 Male, age 76, both hemispheres 43.0
2622 Female, age 67, right hemisphere 41.1
2692 Male, age 74, both hemispheres 40.1
Perirhinal gyrus
nTPM: 60.2
1847 Female, age 91, left hemisphere 67.6
1794 Male, age 80, right hemisphere 65.3
1841 Female, age 85, right hemisphere 59.9
2521 Female, age 94, right hemisphere 56.9
2848 Male, age 76, right hemisphere 51.2
Subiculum
nTPM: 45.5
1901 Male, age 80, both hemispheres 58.5
1977 Female, age 85, both hemispheres 53.1
2042 Male, age 76, both hemispheres 43.6
2438 Female, age 94, left hemisphere 43.1
2619 Male, age 74, both hemispheres 38.5
2729 Female, age 91, right hemisphere 36.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.2
Samples: 197

Max nTPM: 6.7
Min nTPM: 0.3
Std nTPM: 1.2
Median nTPM: 2.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 6.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 6.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 6.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 6.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 5.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 5.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 5.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 5.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 5.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 5.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 4.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.8
FF:10169-103B7 60 years, female 97.6
FF:10153-102I9 76 years, female 56.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.8
Pig sample Sample description nTPM
Subiculum
nTPM: 49.6
Samples: 4

Max nTPM: 58.0
Min nTPM: 45.7
Sample A Female 58.0
Sample B Female 45.7
Sample C Male 48.1
Sample D Male 46.5
Dorsal hippocampus
nTPM: 47.9
Samples: 4

Max nTPM: 55.0
Min nTPM: 36.9
Sample A Female 55.0
Sample B Female 52.1
Sample C Male 47.5
Sample D Male 36.9
Entorhinal cortex
nTPM: 54.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 48.0
Sample A Female 57.5
Sample B Female 56.1
Sample C Male 57.7
Sample D Male 48.0
Ventral hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 47.4
Min nTPM: 36.6
Sample A Female 45.5
Sample B Female 36.6
Sample C Male 46.8
Sample D Male 47.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.4
Samples: 4

Max nTPM: 85.3
Min nTPM: 58.0
Sample A Male 58.0
Sample B Male 59.2
Sample C Female 58.9
Sample D Female 85.3
Hippocampal formation
nTPM: 64.3
Samples: 4

Max nTPM: 76.0
Min nTPM: 54.4
Sample A Male 57.5
Sample B Male 69.2
Sample C Female 76.0
Sample D Female 54.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
70303004 Antisense, RP_050609_01_D04, Mouse strain C57BL/6J (56 days, male) 3.3

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