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IMMUNE CELL GRANULOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
Granulocytes
GRANULOCYTES - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:13346.7 nTPM
Monaco:2661.9 nTPM

GRANULOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 13346.7
HPA sample nTPM
Basophil
nTPM: 11505.3
Samples: 4

Max nTPM: 14070.7
Min nTPM: 9771.7
P10809_1038 9771.7
P10809_1057 11981.2
P10809_1084 14070.7
P10809_1102 10197.6
Eosinophil
nTPM: 13346.7
Samples: 6

Max nTPM: 14859.8
Min nTPM: 9922.3
P10809_1002 14481.1
P10809_1021 13054.8
P10809_1040 13778.4
P10809_1059 14859.8
P10809_1078 9922.3
P10809_1101 13983.7
Neutrophil
nTPM: 8491.7
Samples: 6

Max nTPM: 10984.4
Min nTPM: 6129.3
P10809_1019 6129.3
P10809_1032 10984.4
P10809_1051 9058.1
P10809_1070 8904.8
P10809_1079 7127.1
P10809_1096 8746.7

GRANULOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 2661.9
Monaco sample nTPM
Basophil
nTPM: 1396.0
Samples: 4

Max nTPM: 1640.1
Min nTPM: 1133.7
RHH5320_R3687 1640.1
RHH5228_R3600 1472.1
RHH5257_R3629 1133.7
RHH5286_R3658 1337.9
Neutrophil
nTPM: 2662.0
Samples: 4

Max nTPM: 3972.3
Min nTPM: 1971.9
RHH5319_R3686 1971.9
RHH5227_R3599 3972.3
RHH5256_R3628 2671.7
RHH5285_R3657 2031.9

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