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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1169.5
nTPM
FANTOM5:
1249.2
Scaled Tags Per Million
Pig:
709.5
nTPM
Allen mouse:
12.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1169.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 970.5
2301
Female, age 85, both hemispheres
1116.1
2188
Female, age 91, both hemispheres
989.4
2090
Male, age 80, both hemispheres
975.9
1984
Male, age 76, both hemispheres
800.6
Dorsal cochlear nucleus nTPM: 898.7
2058
Male, age 76, both hemispheres
942.0
2802
Male, age 74, right hemisphere
936.3
2187
Female, age 91, both hemispheres
923.1
2370
Male, age 61, both hemispheres
878.5
2378
Male, age 80, both hemispheres
813.8
Dorsal tegmental nucleus nTPM: 895.4
2083
Male, age 80, both hemispheres
1024.6
2326
Male, age 74, both hemispheres
932.9
2358
Male, age 61, both hemispheres
834.5
1936
Male, age 76, left hemisphere
789.6
Dorsolateral tegmental area nTPM: 847.4
2751
Female, age 85, both hemispheres
1013.2
2654
Male, age 80, both hemispheres
936.2
2337
Male, age 61, both hemispheres
774.7
2360
Male, age 74, both hemispheres
756.6
2141
Male, age 76, both hemispheres
756.4
Kolliker-Fuse nucleus nTPM: 1003.8
2315
Male, age 76, right hemisphere
1036.4
2793
Female, age 91, left hemisphere
1022.7
2163
Male, age 80, both hemispheres
952.2
Lateral lemniscal nuclei nTPM: 1043.4
2169
Male, age 76, both hemispheres
1122.5
2746
Female, age 85, left hemisphere
1094.8
2036
Male, age 80, both hemispheres
1041.3
2453
Male, age 74, right hemisphere
989.9
2320
Female, age 91, left hemisphere
968.2
Lateral parabrachial nucleus nTPM: 1041.7
2792
Male, age 76, both hemispheres
1151.0
2139
Female, age 85, right hemisphere
1138.1
2013
Male, age 80, both hemispheres
1028.1
2790
Male, age 61, both hemispheres
849.5
Lateral vestibular nucleus nTPM: 956.6
2311
Male, age 80, both hemispheres
985.2
2184
Male, age 76, both hemispheres
928.1
Locus coeruleus nTPM: 853.8
2014
Male, age 55, unknown
1011.5
2317
Female, age 72, unknown
879.3
2123
Female, age 91, both hemispheres
869.1
2162
Male, age 80, both hemispheres
846.7
1980
Male, age 76, both hemispheres
837.3
2788
Male, age 74, unknown
775.1
2720
Male, age 74, both hemispheres
757.9
Medial parabrachial nucleus nTPM: 935.8
2170
Female, age 91, both hemispheres
980.8
2463
Female, age 85, right hemisphere
976.3
2156
Male, age 61, both hemispheres
955.4
2854
Male, age 80, both hemispheres
894.2
2786
Male, age 76, both hemispheres
872.1
Medial periolivary nuclei nTPM: 1022.8
2063
Male, age 76, both hemispheres
1211.2
2791
Male, age 74, right hemisphere
1121.4
2171
Female, age 85, both hemispheres
1018.8
2081
Male, age 80, both hemispheres
931.0
2458
Female, age 91, both hemispheres
831.7
Motor facial nucleus nTPM: 1026.6
2365
Male, age 74, right hemisphere
1240.4
2062
Male, age 76, both hemispheres
1209.2
2126
Male, age 61, both hemispheres
965.9
2697
Female, age 85, both hemispheres
947.3
2327
Male, age 80, both hemispheres
944.2
2795
Female, age 91, both hemispheres
852.5
Motor trigeminal nucleus nTPM: 942.3
2560
Male, age 74, both hemispheres
1036.5
2079
Male, age 80, both hemispheres
1009.2
2335
Male, age 61, both hemispheres
931.5
2309
Male, age 76, both hemispheres
899.1
2321
Female, age 91, both hemispheres
835.3
Nuclei of the trapezoid body nTPM: 1041.5
1983
Male, age 76, both hemispheres
1164.6
2159
Male, age 61, both hemispheres
1164.3
2735
Female, age 85, both hemispheres
1055.0
2166
Male, age 80, both hemispheres
941.0
2368
Female, age 91, both hemispheres
882.5
Nucleus raphe magnus nTPM: 1061.1
2160
Male, age 61, both hemispheres
1299.1
2455
Male, age 74, both hemispheres
1116.8
2172
Female, age 85, both hemispheres
1039.5
2051
Male, age 76, both hemispheres
1006.3
2328
Male, age 80, both hemispheres
983.0
2459
Female, age 91, both hemispheres
922.1
Paramedian reticular nucleus nTPM: 963.5
2057
Male, age 80, both hemispheres
1054.5
2050
Female, age 85, both hemispheres
1049.1
2313
Male, age 61, both hemispheres
942.5
2052
Male, age 76, both hemispheres
807.9
Pedunculopontine tegmental nucleus nTPM: 847.4
2334
Male, age 80, both hemispheres
880.9
2338
Male, age 61, both hemispheres
836.9
1921
Female, age 85, both hemispheres
824.3
Pontine nuclei nTPM: 1169.5
1863
Male, age 55, unknown
1298.8
2454
Male, age 74, left hemisphere
1275.3
2787
Female, age 85, both hemispheres
1257.1
2109
Female, age 72, unknown
1244.2
2727
Male, age 61, right hemisphere
1207.9
1968
Male, age 76, left hemisphere
1185.9
2319
Female, age 91, both hemispheres
974.3
2115
Male, age 80, left hemisphere
912.7
Pontine raphe nucleus nTPM: 914.7
2122
Female, age 85, midline
1021.1
2853
Male, age 76, midline
808.4
Posteroventral cochlear nucleus nTPM: 950.8
2135
Female, age 91, both hemispheres
1011.9
2070
Male, age 76, both hemispheres
972.8
2752
Female, age 85, both hemispheres
953.6
2341
Male, age 80, both hemispheres
910.9
2371
Male, age 61, both hemispheres
904.9
Principal sensory trigeminal nucleus nTPM: 1007.3
2158
Male, age 61, both hemispheres
1186.4
2008
Male, age 80, left hemisphere
975.7
2367
Female, age 91, left hemisphere
952.1
2324
Male, age 76, both hemispheres
915.2
Reticular pontine nucleus, caudal nTPM: 1037.2
2092
Male, age 76, both hemispheres
1179.3
2559
Male, age 74, both hemispheres
1023.8
2332
Male, age 80, right hemisphere
982.8
2457
Female, age 91, both hemispheres
962.9
Reticular pontine nucleus, oral nTPM: 1003.3
2361
Male, age 74, both hemispheres
1175.3
2012
Female, age 85, both hemispheres
1046.5
2366
Female, age 91, both hemispheres
1015.0
1939
Male, age 80, both hemispheres
908.5
2167
Male, age 76, both hemispheres
871.2
Reticulotegmental nucleus nTPM: 897.5
2452
Male, age 74, both hemispheres
925.0
2325
Male, age 76, both hemispheres
906.3
2333
Male, age 80, both hemispheres
888.8
2322
Female, age 91, both hemispheres
870.0
Spinal trigeminal nucleus, oral nTPM: 869.5
2164
Male, age 80, both hemispheres
895.7
1978
Male, age 76, both hemispheres
876.3
2737
Female, age 85, both hemispheres
836.6
Subcoeruleus area nTPM: 899.5
2369
Female, age 85, left hemisphere
1030.6
2089
Male, age 76, left hemisphere
992.1
1958
Male, age 80, both hemispheres
920.7
2323
Female, age 91, left hemisphere
798.2
2451
Male, age 74, both hemispheres
756.1
Superior olive nTPM: 1041.4
2364
Male, age 74, right hemisphere
1203.2
2020
Male, age 76, both hemispheres
1127.4
1875
Female, age 85, both hemispheres
1075.4
2329
Male, age 80, right hemisphere
977.6
2561
Female, age 91, both hemispheres
823.4
Ventral periolivary nuclei nTPM: 1027.2
2023
Male, age 76, both hemispheres
1185.8
2130
Female, age 85, both hemispheres
1138.0
2165
Male, age 80, both hemispheres
1040.4
2794
Female, age 91, left hemisphere
744.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 958.4
1959
Male, age 76, both hemispheres
1067.9
2449
Male, age 74, both hemispheres
1049.3
2840
Female, age 85, both hemispheres
959.8
2161
Male, age 80, both hemispheres
915.9
2456
Female, age 91, both hemispheres
880.8
2359
Male, age 61, both hemispheres
876.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
709.5
Pig sample
Sample description
nTPM
Pons nTPM: 709.5
Samples: 4
Max nTPM: 799.9
Min nTPM: 614.9
Sample A
Female
732.7
Sample B
Female
614.9
Sample C
Male
690.6
Sample D
Male
799.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
