HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:7.3 nTPM
HPA Brain:34.7 nTPM
GTEx:7.3 nTPM
FANTOM5:2.9 Scaled Tags Per Million
Pig:31.7 nTPM
Mouse:17.2 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047162
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
2529 Female, age 94, left hemisphere 30.2
1911 Female, age 85, right hemisphere 28.5
1898 Male, age 80, left hemisphere 28.4
1855 Male, age 76, left hemisphere 27.1
2148 Female, age 91, left hemisphere 23.5
2621 Female, age 67, right hemisphere 22.3
Dentate gyrus
nTPM: 26.3
1927 Female, age 91, both hemispheres 32.2
2528 Male, age 74, both hemispheres 29.4
2010 Male, age 76, both hemispheres 25.2
2531 Female, age 67, both hemispheres 24.2
2530 Female, age 94, left hemisphere 23.7
2246 Female, age 85, both hemispheres 23.1
Entorhinal gyrus
nTPM: 28.6
1938 Female, age 85, left hemisphere 33.2
2764 Male, age 80, right hemisphere 31.1
2613 Female, age 94, left hemisphere 29.4
1787 Male, age 76, left hemisphere 29.3
2117 Female, age 91, right hemisphere 25.5
2686 Male, age 75, right hemisphere 23.4
Hippocampus, CA1
nTPM: 26.0
2527 Male, age 74, both hemispheres 27.8
2045 Male, age 76, both hemispheres 27.4
2749 Male, age 80, left hemisphere 27.4
2082 Female, age 91, right hemisphere 24.0
1873 Female, age 85, both hemispheres 23.2
Hippocampus, CA2
nTPM: 25.5
2437 Female, age 94, left hemisphere 28.3
2113 Female, age 91, right hemisphere 27.6
1892 Male, age 76, both hemispheres 26.1
1940 Female, age 85, left hemisphere 24.6
1963 Male, age 80, left hemisphere 23.6
2249 Male, age 74, both hemispheres 23.0
Hippocampus, CA3
nTPM: 26.4
2436 Male, age 74, both hemispheres 30.5
2620 Female, age 94, left hemisphere 28.6
1867 Male, age 76, both hemispheres 27.3
2137 Male, age 80, left hemisphere 26.6
1891 Female, age 85, both hemispheres 25.8
2861 Female, age 67, both hemispheres 19.5
Parahippocampal cortex
nTPM: 28.0
1850 Male, age 80, both hemispheres 34.6
1990 Female, age 91, right hemisphere 31.2
2532 Female, age 72, left hemisphere 31.0
2245 Female, age 91, both hemispheres 30.7
1933 Female, age 85, both hemispheres 28.8
2693 Female, age 94, both hemispheres 26.4
2018 Male, age 76, both hemispheres 25.8
2692 Male, age 74, both hemispheres 25.1
2250 Female, age 67, right hemisphere 24.5
2622 Female, age 67, right hemisphere 22.1
Perirhinal gyrus
nTPM: 34.7
1841 Female, age 85, right hemisphere 38.1
1847 Female, age 91, left hemisphere 37.7
1794 Male, age 80, right hemisphere 35.4
2521 Female, age 94, right hemisphere 33.4
2848 Male, age 76, right hemisphere 29.0
Subiculum
nTPM: 26.4
2438 Female, age 94, left hemisphere 32.0
1977 Female, age 85, both hemispheres 29.4
2619 Male, age 74, both hemispheres 25.3
1901 Male, age 80, both hemispheres 24.2
2729 Female, age 91, right hemisphere 24.0
2042 Male, age 76, both hemispheres 23.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.3
Samples: 197

Max nTPM: 14.3
Min nTPM: 4.5
Std nTPM: 1.5
Median nTPM: 6.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 12.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 11.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 11.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 11.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 10.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 10.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 10.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 10.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 10.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 10.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2.9
FF:10153-102I9 76 years, female 3.7
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.7
Pig sample Sample description nTPM
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 36.8
Min nTPM: 25.7
Sample A Female 36.8
Sample B Female 25.7
Sample C Male 28.5
Sample D Male 28.5
Dorsal hippocampus
nTPM: 31.8
Samples: 4

Max nTPM: 37.2
Min nTPM: 28.1
Sample A Female 37.2
Sample B Female 31.9
Sample C Male 29.8
Sample D Male 28.1
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 31.2
Min nTPM: 27.8
Sample A Female 31.2
Sample B Female 29.4
Sample C Male 30.8
Sample D Male 27.8
Ventral hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 36.1
Min nTPM: 23.4
Sample A Female 31.1
Sample B Female 23.4
Sample C Male 36.1
Sample D Male 32.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.0
Sample A Male 16.1
Sample B Male 15.0
Sample C Female 16.5
Sample D Female 18.3
Hippocampal formation
nTPM: 17.2
Samples: 4

Max nTPM: 17.6
Min nTPM: 16.6
Sample A Male 16.6
Sample B Male 17.2
Sample C Female 17.6
Sample D Female 17.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68844558 Antisense, RP_050222_01_H10, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org