HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:24.7 nTPM
HPA Brain:23.0 nTPM
GTEx:24.7 nTPM
FANTOM5:36.6 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:11.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019223
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
1898 Male, age 80, left hemisphere 24.3
2621 Female, age 67, right hemisphere 23.2
1855 Male, age 76, left hemisphere 19.3
2529 Female, age 94, left hemisphere 18.9
2148 Female, age 91, left hemisphere 16.7
1911 Female, age 85, right hemisphere 14.5
Dentate gyrus
nTPM: 20.8
2010 Male, age 76, both hemispheres 25.1
2531 Female, age 67, both hemispheres 23.5
1927 Female, age 91, both hemispheres 23.3
2530 Female, age 94, left hemisphere 20.1
2246 Female, age 85, both hemispheres 16.8
2528 Male, age 74, both hemispheres 16.1
Entorhinal gyrus
nTPM: 21.6
2613 Female, age 94, left hemisphere 28.2
1938 Female, age 85, left hemisphere 23.4
1787 Male, age 76, left hemisphere 20.7
2686 Male, age 75, right hemisphere 20.4
2764 Male, age 80, right hemisphere 19.5
2117 Female, age 91, right hemisphere 17.2
Hippocampus, CA1
nTPM: 22.2
2749 Male, age 80, left hemisphere 30.7
2045 Male, age 76, both hemispheres 23.9
1873 Female, age 85, both hemispheres 22.4
2527 Male, age 74, both hemispheres 17.4
2082 Female, age 91, right hemisphere 16.4
Hippocampus, CA2
nTPM: 21.5
1892 Male, age 76, both hemispheres 28.7
1963 Male, age 80, left hemisphere 24.6
2437 Female, age 94, left hemisphere 22.3
2249 Male, age 74, both hemispheres 19.0
2113 Female, age 91, right hemisphere 17.4
1940 Female, age 85, left hemisphere 16.7
Hippocampus, CA3
nTPM: 21.9
2436 Male, age 74, both hemispheres 29.4
1867 Male, age 76, both hemispheres 27.2
2861 Female, age 67, both hemispheres 22.0
2620 Female, age 94, left hemisphere 20.8
2137 Male, age 80, left hemisphere 16.3
1891 Female, age 85, both hemispheres 15.4
Parahippocampal cortex
nTPM: 20.4
1850 Male, age 80, both hemispheres 23.0
2622 Female, age 67, right hemisphere 22.1
1933 Female, age 85, both hemispheres 21.3
2532 Female, age 72, left hemisphere 21.2
2693 Female, age 94, both hemispheres 21.2
2250 Female, age 67, right hemisphere 20.4
2018 Male, age 76, both hemispheres 19.9
1990 Female, age 91, right hemisphere 19.5
2245 Female, age 91, both hemispheres 17.8
2692 Male, age 74, both hemispheres 17.1
Perirhinal gyrus
nTPM: 23.0
1847 Female, age 91, left hemisphere 30.3
1841 Female, age 85, right hemisphere 22.9
1794 Male, age 80, right hemisphere 22.0
2848 Male, age 76, right hemisphere 20.4
2521 Female, age 94, right hemisphere 19.3
Subiculum
nTPM: 17.8
1977 Female, age 85, both hemispheres 18.8
2042 Male, age 76, both hemispheres 18.7
2729 Female, age 91, right hemisphere 17.9
2438 Female, age 94, left hemisphere 17.5
1901 Male, age 80, both hemispheres 17.0
2619 Male, age 74, both hemispheres 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.7
Samples: 197

Max nTPM: 56.9
Min nTPM: 10.9
Std nTPM: 9.5
Median nTPM: 22.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 56.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 55.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 54.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 52.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 51.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 50.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 49.2
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 47.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 43.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.6
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Subiculum
nTPM: 17.9
Samples: 4

Max nTPM: 27.2
Min nTPM: 12.5
Sample A Female 27.2
Sample B Female 15.9
Sample C Male 15.9
Sample D Male 12.5
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 31.6
Min nTPM: 11.3
Sample A Female 31.6
Sample B Female 19.5
Sample C Male 22.9
Sample D Male 11.3
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 22.7
Min nTPM: 10.1
Sample A Female 22.7
Sample B Female 17.4
Sample C Male 20.9
Sample D Male 10.1
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 21.9
Min nTPM: 13.9
Sample A Female 21.6
Sample B Female 13.9
Sample C Male 21.9
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.3
Sample A Male 9.3
Sample B Male 9.9
Sample C Female 10.1
Sample D Female 11.1
Hippocampal formation
nTPM: 11.0
Samples: 4

Max nTPM: 11.5
Min nTPM: 10.6
Sample A Male 10.6
Sample B Male 11.1
Sample C Female 10.8
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
67979040 Antisense, RP_040923_02_B12, Mouse strain C57BL/6J (56 days, male) 0.2

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