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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.0
nTPM
HPA Brain:
31.2
nTPM
GTEx:
21.0
nTPM
FANTOM5:
86.5
Scaled Tags Per Million
Pig:
22.5
nTPM
Mouse:
22.4
nTPM
Allen mouse:
8.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
31.2
Sample id
Sample description
nTPM
Amygdala nTPM: 31.2
2814
Male, age 76, right hemisphere
36.9
2695
Female, age 67, right hemisphere
36.6
2514
Male, age 75, right hemisphere
31.4
1987
Female, age 91, left hemisphere
29.2
2517
Female, age 94, left hemisphere
22.0
Basal amygdala nTPM: 28.8
2609
Male, age 75, right hemisphere
39.0
1955
Male, age 76, both hemispheres
31.7
2110
Male, age 80, left hemisphere
29.4
2243
Female, age 91, right hemisphere
29.1
2827
Female, age 67, right hemisphere
22.3
2685
Female, age 94, left hemisphere
21.2
Central amygdala nTPM: 30.6
2515
Male, age 75, right hemisphere
35.4
1905
Male, age 76, both hemispheres
35.2
2701
Female, age 91, right hemisphere
32.0
2239
Male, age 80, left hemisphere
27.8
2826
Female, age 94, left hemisphere
22.8
Corticomedial amygdala nTPM: 30.3
2428
Male, age 75, right hemisphere
35.9
2240
Male, age 76, both hemispheres
34.8
2429
Female, age 94, left hemisphere
29.7
2242
Female, age 91, right hemisphere
27.3
2535
Female, age 67, right hemisphere
27.0
2829
Male, age 80, left hemisphere
27.0
Lateral amygdala nTPM: 26.5
1883
Male, age 76, both hemispheres
31.9
2516
Male, age 75, right hemisphere
31.0
2256
Male, age 80, left hemisphere
27.6
2255
Female, age 91, right hemisphere
26.4
2830
Female, age 67, right hemisphere
22.8
2534
Female, age 94, left hemisphere
19.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
21.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 21.0
Samples: 152
Max nTPM: 87.8
Min nTPM: 3.8
Std nTPM: 16.4
Median nTPM: 14.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
87.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
80.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
67.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
64.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
57.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
57.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
53.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
53.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
51.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
51.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
50.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
50.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
48.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
48.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
46.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
45.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
45.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
42.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
41.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
38.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
38.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
37.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
37.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
37.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
36.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
35.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
34.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
34.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
34.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
33.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
32.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
31.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
31.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
28.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
28.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
28.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
28.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
28.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
27.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
24.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
24.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
24.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
24.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
23.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
23.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
23.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
21.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
20.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
20.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
20.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
20.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
20.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
19.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
19.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
19.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
19.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
19.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
19.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
18.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
18.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
18.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
17.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
17.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
17.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
16.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
16.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
16.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
15.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
15.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
15.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
15.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
14.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
14.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
14.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
14.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
14.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
13.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
13.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
13.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
13.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
13.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
13.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
12.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
12.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
12.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
12.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
12.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
12.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
11.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
11.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
11.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
11.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
11.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
11.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
11.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
10.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
10.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
10.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
10.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
10.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
10.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
9.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
9.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
9.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
9.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
9.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
9.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
9.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
9.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
9.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
9.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
9.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
9.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
8.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
8.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
8.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
8.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
8.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
8.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
8.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
7.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
7.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
7.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
7.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
7.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
7.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
7.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
7.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
6.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
6.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
6.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
5.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
5.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
5.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
5.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
5.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
5.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
5.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
5.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
5.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
5.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
4.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
4.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
4.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
4.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
4.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
3.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
22.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 22.4
Samples: 4
Max nTPM: 25.3
Min nTPM: 18.6
Sample A
Male
20.9
Sample B
Male
18.6
Sample C
Female
25.3
Sample D
Female
24.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.