HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.0 nTPM
HPA Brain:28.0 nTPM
GTEx:20.0 nTPM
FANTOM5:114.5 Scaled Tags Per Million
Pig:21.2 nTPM
Mouse:36.4 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031092Antibody HPA031093Antibody HPA031095Antibody CAB009315
Glial cells Not detectedLowNot detectedMedium
Neuronal cells MediumMediumHighNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.0
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
2621 Female, age 67, right hemisphere 31.5
1855 Male, age 76, left hemisphere 29.3
1898 Male, age 80, left hemisphere 28.8
1911 Female, age 85, right hemisphere 26.7
2148 Female, age 91, left hemisphere 23.3
2529 Female, age 94, left hemisphere 20.6
Dentate gyrus
nTPM: 27.3
2246 Female, age 85, both hemispheres 30.4
2010 Male, age 76, both hemispheres 30.2
2530 Female, age 94, left hemisphere 29.7
2531 Female, age 67, both hemispheres 27.3
2528 Male, age 74, both hemispheres 23.3
1927 Female, age 91, both hemispheres 22.7
Entorhinal gyrus
nTPM: 22.3
2117 Female, age 91, right hemisphere 27.3
2686 Male, age 75, right hemisphere 23.0
1787 Male, age 76, left hemisphere 22.3
1938 Female, age 85, left hemisphere 21.6
2613 Female, age 94, left hemisphere 20.6
2764 Male, age 80, right hemisphere 18.8
Hippocampus, CA1
nTPM: 28.0
1873 Female, age 85, both hemispheres 33.4
2749 Male, age 80, left hemisphere 33.1
2527 Male, age 74, both hemispheres 25.9
2082 Female, age 91, right hemisphere 25.3
2045 Male, age 76, both hemispheres 22.1
Hippocampus, CA2
nTPM: 24.7
1963 Male, age 80, left hemisphere 29.4
1940 Female, age 85, left hemisphere 26.9
2249 Male, age 74, both hemispheres 25.1
2113 Female, age 91, right hemisphere 24.3
2437 Female, age 94, left hemisphere 21.7
1892 Male, age 76, both hemispheres 20.6
Hippocampus, CA3
nTPM: 24.5
1891 Female, age 85, both hemispheres 28.6
2861 Female, age 67, both hemispheres 27.8
2620 Female, age 94, left hemisphere 25.8
2436 Male, age 74, both hemispheres 24.7
1867 Male, age 76, both hemispheres 21.3
2137 Male, age 80, left hemisphere 18.6
Parahippocampal cortex
nTPM: 22.0
2692 Male, age 74, both hemispheres 27.0
1850 Male, age 80, both hemispheres 22.7
2693 Female, age 94, both hemispheres 22.7
2622 Female, age 67, right hemisphere 22.4
1990 Female, age 91, right hemisphere 22.3
1933 Female, age 85, both hemispheres 21.9
2018 Male, age 76, both hemispheres 21.7
2250 Female, age 67, right hemisphere 21.5
2245 Female, age 91, both hemispheres 19.5
2532 Female, age 72, left hemisphere 18.7
Perirhinal gyrus
nTPM: 20.1
2521 Female, age 94, right hemisphere 24.4
1847 Female, age 91, left hemisphere 19.8
1841 Female, age 85, right hemisphere 19.5
2848 Male, age 76, right hemisphere 18.5
1794 Male, age 80, right hemisphere 18.4
Subiculum
nTPM: 27.5
2042 Male, age 76, both hemispheres 32.9
2619 Male, age 74, both hemispheres 29.1
2438 Female, age 94, left hemisphere 27.2
1901 Male, age 80, both hemispheres 26.3
2729 Female, age 91, right hemisphere 26.0
1977 Female, age 85, both hemispheres 23.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 90.9
Min nTPM: 2.8
Std nTPM: 16.8
Median nTPM: 13.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 90.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 89.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 82.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 71.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 67.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 67.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 64.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 63.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 58.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 54.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 51.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.5
FF:10169-103B7 60 years, female 136.0
FF:10153-102I9 76 years, female 93.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.2
Pig sample Sample description nTPM
Subiculum
nTPM: 19.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 22.8
Sample C Male 20.6
Sample D Male 18.9
Dorsal hippocampus
nTPM: 21.2
Samples: 4

Max nTPM: 24.7
Min nTPM: 16.9
Sample A Female 16.9
Sample B Female 24.7
Sample C Male 24.3
Sample D Male 18.9
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 20.0
Min nTPM: 10.9
Sample A Female 11.9
Sample B Female 20.0
Sample C Male 13.9
Sample D Male 10.9
Ventral hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 25.1
Min nTPM: 16.8
Sample A Female 16.8
Sample B Female 25.1
Sample C Male 23.0
Sample D Male 17.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 31.0
Min nTPM: 15.7
Sample A Male 19.3
Sample B Male 15.7
Sample C Female 31.0
Sample D Female 23.6
Hippocampal formation
nTPM: 36.4
Samples: 4

Max nTPM: 46.3
Min nTPM: 26.7
Sample A Male 26.7
Sample B Male 38.0
Sample C Female 46.3
Sample D Female 34.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
70525820 Antisense, RP_050317_04_G06, Mouse strain C57BL/6J (56 days, male) 8.8

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