HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:442.5 nTPM
HPA Brain:495.0 nTPM
GTEx:442.5 nTPM
FANTOM5:374.5 Scaled Tags Per Million
Pig:210.4 nTPM
Mouse:0.2 nTPM
Allen mouse:12.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012107
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 495.0
Sample id Sample description nTPM
Hippocampus
nTPM: 438.4
1898 Male, age 80, left hemisphere 521.8
1911 Female, age 85, right hemisphere 500.1
2529 Female, age 94, left hemisphere 487.5
2621 Female, age 67, right hemisphere 401.0
1855 Male, age 76, left hemisphere 376.9
2148 Female, age 91, left hemisphere 343.3
Dentate gyrus
nTPM: 453.7
2530 Female, age 94, left hemisphere 613.1
2528 Male, age 74, both hemispheres 555.2
2010 Male, age 76, both hemispheres 529.8
2246 Female, age 85, both hemispheres 443.0
2531 Female, age 67, both hemispheres 342.4
1927 Female, age 91, both hemispheres 238.6
Entorhinal gyrus
nTPM: 425.0
2117 Female, age 91, right hemisphere 589.0
2686 Male, age 75, right hemisphere 489.2
2764 Male, age 80, right hemisphere 441.3
1938 Female, age 85, left hemisphere 420.5
2613 Female, age 94, left hemisphere 332.5
1787 Male, age 76, left hemisphere 277.2
Hippocampus, CA1
nTPM: 402.4
2749 Male, age 80, left hemisphere 500.5
1873 Female, age 85, both hemispheres 482.2
2527 Male, age 74, both hemispheres 471.4
2082 Female, age 91, right hemisphere 339.0
2045 Male, age 76, both hemispheres 218.9
Hippocampus, CA2
nTPM: 441.3
1963 Male, age 80, left hemisphere 618.7
2249 Male, age 74, both hemispheres 556.4
2437 Female, age 94, left hemisphere 455.6
1940 Female, age 85, left hemisphere 406.4
2113 Female, age 91, right hemisphere 360.9
1892 Male, age 76, both hemispheres 249.6
Hippocampus, CA3
nTPM: 361.4
1891 Female, age 85, both hemispheres 564.6
2436 Male, age 74, both hemispheres 384.8
1867 Male, age 76, both hemispheres 341.1
2861 Female, age 67, both hemispheres 334.2
2137 Male, age 80, left hemisphere 280.2
2620 Female, age 94, left hemisphere 263.3
Parahippocampal cortex
nTPM: 338.9
2692 Male, age 74, both hemispheres 455.2
2532 Female, age 72, left hemisphere 430.8
1933 Female, age 85, both hemispheres 364.1
2018 Male, age 76, both hemispheres 331.4
1990 Female, age 91, right hemisphere 323.8
2693 Female, age 94, both hemispheres 311.5
1850 Male, age 80, both hemispheres 308.6
2250 Female, age 67, right hemisphere 297.9
2622 Female, age 67, right hemisphere 288.2
2245 Female, age 91, both hemispheres 277.2
Perirhinal gyrus
nTPM: 215.0
2848 Male, age 76, right hemisphere 249.2
2521 Female, age 94, right hemisphere 240.0
1794 Male, age 80, right hemisphere 210.7
1847 Female, age 91, left hemisphere 208.6
1841 Female, age 85, right hemisphere 166.4
Subiculum
nTPM: 495.0
2042 Male, age 76, both hemispheres 736.1
1901 Male, age 80, both hemispheres 509.3
1977 Female, age 85, both hemispheres 506.6
2438 Female, age 94, left hemisphere 435.7
2729 Female, age 91, right hemisphere 415.8
2619 Male, age 74, both hemispheres 366.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 442.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 442.5
Samples: 197

Max nTPM: 1399.7
Min nTPM: 26.8
Std nTPM: 205.2
Median nTPM: 418.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1399.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1061.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1032.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 991.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 974.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 878.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 868.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 842.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 829.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 816.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 815.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 374.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 374.5
FF:10169-103B7 60 years, female 441.3
FF:10153-102I9 76 years, female 307.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 210.4
Pig sample Sample description nTPM
Subiculum
nTPM: 210.4
Samples: 4

Max nTPM: 230.4
Min nTPM: 190.7
Sample A Female 193.2
Sample B Female 227.4
Sample C Male 230.4
Sample D Male 190.7
Dorsal hippocampus
nTPM: 179.8
Samples: 4

Max nTPM: 203.8
Min nTPM: 144.0
Sample A Female 200.0
Sample B Female 171.4
Sample C Male 203.8
Sample D Male 144.0
Entorhinal cortex
nTPM: 171.7
Samples: 4

Max nTPM: 211.0
Min nTPM: 138.1
Sample A Female 138.1
Sample B Female 211.0
Sample C Male 183.8
Sample D Male 154.0
Ventral hippocampus
nTPM: 203.2
Samples: 4

Max nTPM: 273.9
Min nTPM: 165.5
Sample A Female 165.5
Sample B Female 189.0
Sample C Male 273.9
Sample D Male 184.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 608.6
Samples: 4

Max nTPM: 671.5
Min nTPM: 549.8
Sample A Male 671.5
Sample B Male 549.8
Sample C Female 598.2
Sample D Female 614.8
Hippocampal formation
nTPM: 637.7
Samples: 4

Max nTPM: 704.8
Min nTPM: 612.4
Sample A Male 618.0
Sample B Male 612.4
Sample C Female 704.8
Sample D Female 615.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 13.3
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 12.5
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.2
Hippocampal formation
Expression energy: 12.9
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 13.3
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 12.5
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.2

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