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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1087.5
nTPM
FANTOM5:
467.7
Scaled Tags Per Million
Pig:
313.9
nTPM
Allen mouse:
15.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1087.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1072.9
2188
Female, age 91, both hemispheres
1387.0
2301
Female, age 85, both hemispheres
1322.5
2090
Male, age 80, both hemispheres
1023.4
1984
Male, age 76, both hemispheres
558.6
Dorsal cochlear nucleus nTPM: 846.3
2187
Female, age 91, both hemispheres
1166.6
2378
Male, age 80, both hemispheres
862.2
2802
Male, age 74, right hemisphere
823.4
2058
Male, age 76, both hemispheres
707.4
2370
Male, age 61, both hemispheres
672.2
Dorsal tegmental nucleus nTPM: 789.5
2083
Male, age 80, both hemispheres
997.5
2326
Male, age 74, both hemispheres
840.2
1936
Male, age 76, left hemisphere
677.2
2358
Male, age 61, both hemispheres
643.0
Dorsolateral tegmental area nTPM: 816.6
2751
Female, age 85, both hemispheres
1319.2
2654
Male, age 80, both hemispheres
965.6
2337
Male, age 61, both hemispheres
695.6
2360
Male, age 74, both hemispheres
594.1
2141
Male, age 76, both hemispheres
508.5
Kolliker-Fuse nucleus nTPM: 952.5
2793
Female, age 91, left hemisphere
1304.7
2315
Male, age 76, right hemisphere
780.0
2163
Male, age 80, both hemispheres
772.9
Lateral lemniscal nuclei nTPM: 822.0
2320
Female, age 91, left hemisphere
1106.1
2036
Male, age 80, both hemispheres
909.8
2169
Male, age 76, both hemispheres
785.2
2746
Female, age 85, left hemisphere
670.3
2453
Male, age 74, right hemisphere
638.8
Lateral parabrachial nucleus nTPM: 1087.5
2792
Male, age 76, both hemispheres
1480.4
2790
Male, age 61, both hemispheres
1221.3
2013
Male, age 80, both hemispheres
898.7
2139
Female, age 85, right hemisphere
749.7
Lateral vestibular nucleus nTPM: 883.3
2311
Male, age 80, both hemispheres
1036.5
2184
Male, age 76, both hemispheres
730.1
Locus coeruleus nTPM: 675.7
2720
Male, age 74, both hemispheres
854.0
2317
Female, age 72, unknown
748.9
2162
Male, age 80, both hemispheres
738.4
2014
Male, age 55, unknown
728.9
2123
Female, age 91, both hemispheres
631.5
2788
Male, age 74, unknown
544.3
1980
Male, age 76, both hemispheres
484.2
Medial parabrachial nucleus nTPM: 976.6
2170
Female, age 91, both hemispheres
1223.1
2463
Female, age 85, right hemisphere
1065.6
2156
Male, age 61, both hemispheres
906.8
2854
Male, age 80, both hemispheres
869.6
2786
Male, age 76, both hemispheres
818.1
Medial periolivary nuclei nTPM: 782.5
2458
Female, age 91, both hemispheres
987.4
2081
Male, age 80, both hemispheres
848.5
2791
Male, age 74, right hemisphere
808.6
2063
Male, age 76, both hemispheres
793.9
2171
Female, age 85, both hemispheres
474.4
Motor facial nucleus nTPM: 808.4
2795
Female, age 91, both hemispheres
947.0
2697
Female, age 85, both hemispheres
874.4
2126
Male, age 61, both hemispheres
845.3
2365
Male, age 74, right hemisphere
826.5
2327
Male, age 80, both hemispheres
679.6
2062
Male, age 76, both hemispheres
677.5
Motor trigeminal nucleus nTPM: 759.1
2321
Female, age 91, both hemispheres
1005.0
2560
Male, age 74, both hemispheres
795.8
2309
Male, age 76, both hemispheres
720.3
2079
Male, age 80, both hemispheres
689.0
2335
Male, age 61, both hemispheres
585.3
Nuclei of the trapezoid body nTPM: 762.3
2368
Female, age 91, both hemispheres
1037.6
2166
Male, age 80, both hemispheres
849.9
1983
Male, age 76, both hemispheres
747.0
2159
Male, age 61, both hemispheres
676.1
2735
Female, age 85, both hemispheres
500.9
Nucleus raphe magnus nTPM: 675.9
2459
Female, age 91, both hemispheres
941.6
2328
Male, age 80, both hemispheres
787.3
2051
Male, age 76, both hemispheres
767.1
2455
Male, age 74, both hemispheres
686.7
2160
Male, age 61, both hemispheres
478.9
2172
Female, age 85, both hemispheres
393.6
Paramedian reticular nucleus nTPM: 844.2
2052
Male, age 76, both hemispheres
916.3
2057
Male, age 80, both hemispheres
908.6
2050
Female, age 85, both hemispheres
777.9
2313
Male, age 61, both hemispheres
774.1
Pedunculopontine tegmental nucleus nTPM: 771.3
2334
Male, age 80, both hemispheres
967.4
1921
Female, age 85, both hemispheres
710.2
2338
Male, age 61, both hemispheres
636.2
Pontine nuclei nTPM: 832.3
2319
Female, age 91, both hemispheres
1101.5
2454
Male, age 74, left hemisphere
1062.9
2109
Female, age 72, unknown
1010.5
1863
Male, age 55, unknown
905.8
1968
Male, age 76, left hemisphere
849.1
2115
Male, age 80, left hemisphere
665.7
2727
Male, age 61, right hemisphere
550.1
2787
Female, age 85, both hemispheres
512.7
Pontine raphe nucleus nTPM: 711.1
2853
Male, age 76, midline
728.7
2122
Female, age 85, midline
693.4
Posteroventral cochlear nucleus nTPM: 1085.8
2135
Female, age 91, both hemispheres
1497.3
2341
Male, age 80, both hemispheres
1426.8
2070
Male, age 76, both hemispheres
946.9
2371
Male, age 61, both hemispheres
889.2
2752
Female, age 85, both hemispheres
669.0
Principal sensory trigeminal nucleus nTPM: 756.1
2367
Female, age 91, left hemisphere
1090.1
2008
Male, age 80, left hemisphere
702.5
2324
Male, age 76, both hemispheres
698.7
2158
Male, age 61, both hemispheres
533.2
Reticular pontine nucleus, caudal nTPM: 950.6
2457
Female, age 91, both hemispheres
1253.9
2092
Male, age 76, both hemispheres
971.5
2559
Male, age 74, both hemispheres
908.8
2332
Male, age 80, right hemisphere
668.2
Reticular pontine nucleus, oral nTPM: 959.2
2366
Female, age 91, both hemispheres
1213.7
2361
Male, age 74, both hemispheres
932.6
1939
Male, age 80, both hemispheres
907.8
2012
Female, age 85, both hemispheres
900.5
2167
Male, age 76, both hemispheres
841.6
Reticulotegmental nucleus nTPM: 746.1
2322
Female, age 91, both hemispheres
951.1
2333
Male, age 80, both hemispheres
768.9
2452
Male, age 74, both hemispheres
737.2
2325
Male, age 76, both hemispheres
527.3
Spinal trigeminal nucleus, oral nTPM: 693.8
2164
Male, age 80, both hemispheres
744.6
1978
Male, age 76, both hemispheres
729.6
2737
Female, age 85, both hemispheres
607.1
Subcoeruleus area nTPM: 880.2
2369
Female, age 85, left hemisphere
1502.9
2089
Male, age 76, left hemisphere
795.8
1958
Male, age 80, both hemispheres
780.6
2451
Male, age 74, both hemispheres
711.6
2323
Female, age 91, left hemisphere
610.2
Superior olive nTPM: 869.2
2020
Male, age 76, both hemispheres
1086.3
2561
Female, age 91, both hemispheres
828.5
2329
Male, age 80, right hemisphere
826.7
2364
Male, age 74, right hemisphere
822.3
1875
Female, age 85, both hemispheres
782.4
Ventral periolivary nuclei nTPM: 817.9
2023
Male, age 76, both hemispheres
1228.4
2794
Female, age 91, left hemisphere
753.1
2165
Male, age 80, both hemispheres
729.7
2130
Female, age 85, both hemispheres
560.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 841.9
2456
Female, age 91, both hemispheres
1076.3
1959
Male, age 76, both hemispheres
919.0
2359
Male, age 61, both hemispheres
872.0
2840
Female, age 85, both hemispheres
779.1
2161
Male, age 80, both hemispheres
744.2
2449
Male, age 74, both hemispheres
660.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
313.9
Pig sample
Sample description
nTPM
Pons nTPM: 313.9
Samples: 4
Max nTPM: 430.2
Min nTPM: 224.4
Sample A
Female
224.4
Sample B
Female
270.1
Sample C
Male
331.0
Sample D
Male
430.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
