HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:38.7 nTPM
HPA Brain:26.8 nTPM
GTEx:38.7 nTPM
FANTOM5:35.1 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:11.8 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044657
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 19.3
1911 Female, age 85, right hemisphere 26.4
2529 Female, age 94, left hemisphere 21.3
1898 Male, age 80, left hemisphere 19.0
2621 Female, age 67, right hemisphere 17.4
2148 Female, age 91, left hemisphere 16.7
1855 Male, age 76, left hemisphere 14.9
Dentate gyrus
nTPM: 18.0
2530 Female, age 94, left hemisphere 25.2
2010 Male, age 76, both hemispheres 21.8
2528 Male, age 74, both hemispheres 17.2
2246 Female, age 85, both hemispheres 16.4
1927 Female, age 91, both hemispheres 14.3
2531 Female, age 67, both hemispheres 12.9
Entorhinal gyrus
nTPM: 20.6
2117 Female, age 91, right hemisphere 33.3
2764 Male, age 80, right hemisphere 26.4
1938 Female, age 85, left hemisphere 17.4
2686 Male, age 75, right hemisphere 17.3
1787 Male, age 76, left hemisphere 14.7
2613 Female, age 94, left hemisphere 14.3
Hippocampus, CA1
nTPM: 15.9
2082 Female, age 91, right hemisphere 19.1
1873 Female, age 85, both hemispheres 17.4
2527 Male, age 74, both hemispheres 16.9
2749 Male, age 80, left hemisphere 16.4
2045 Male, age 76, both hemispheres 9.6
Hippocampus, CA2
nTPM: 19.6
1963 Male, age 80, left hemisphere 25.1
2249 Male, age 74, both hemispheres 24.6
2113 Female, age 91, right hemisphere 19.4
1940 Female, age 85, left hemisphere 17.9
2437 Female, age 94, left hemisphere 17.5
1892 Male, age 76, both hemispheres 13.1
Hippocampus, CA3
nTPM: 14.7
1891 Female, age 85, both hemispheres 28.3
1867 Male, age 76, both hemispheres 18.7
2436 Male, age 74, both hemispheres 11.8
2137 Male, age 80, left hemisphere 10.0
2620 Female, age 94, left hemisphere 9.9
2861 Female, age 67, both hemispheres 9.7
Parahippocampal cortex
nTPM: 15.7
2532 Female, age 72, left hemisphere 22.6
1990 Female, age 91, right hemisphere 20.2
2692 Male, age 74, both hemispheres 20.1
2018 Male, age 76, both hemispheres 19.2
1850 Male, age 80, both hemispheres 15.1
1933 Female, age 85, both hemispheres 14.4
2693 Female, age 94, both hemispheres 13.7
2245 Female, age 91, both hemispheres 13.1
2250 Female, age 67, right hemisphere 10.3
2622 Female, age 67, right hemisphere 8.7
Perirhinal gyrus
nTPM: 10.7
1794 Male, age 80, right hemisphere 12.8
2521 Female, age 94, right hemisphere 12.5
2848 Male, age 76, right hemisphere 10.2
1847 Female, age 91, left hemisphere 9.7
1841 Female, age 85, right hemisphere 8.3
Subiculum
nTPM: 26.8
2042 Male, age 76, both hemispheres 45.0
1901 Male, age 80, both hemispheres 32.7
1977 Female, age 85, both hemispheres 26.8
2438 Female, age 94, left hemisphere 20.3
2619 Male, age 74, both hemispheres 18.2
2729 Female, age 91, right hemisphere 18.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.7
Samples: 197

Max nTPM: 147.5
Min nTPM: 5.8
Std nTPM: 23.9
Median nTPM: 33.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 147.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 109.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 108.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 107.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 106.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 106.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 101.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 98.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 92.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 86.3
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 84.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.1
FF:10153-102I9 76 years, female 39.2
FF:10169-103B7 60 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.1
Sample A Female 9.2
Sample B Female 9.6
Sample C Male 7.1
Sample D Male 9.8
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 9.1
Sample A Female 30.0
Sample B Female 15.3
Sample C Male 28.0
Sample D Male 9.1
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.1
Sample A Female 9.9
Sample B Female 11.6
Sample C Male 8.1
Sample D Male 9.4
Ventral hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 7.1
Sample A Female 15.2
Sample B Female 7.1
Sample C Male 12.2
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.0
Sample A Male 8.4
Sample B Male 6.8
Sample C Female 8.1
Sample D Female 5.0
Hippocampal formation
nTPM: 11.7
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.3
Sample A Male 10.9
Sample B Male 10.3
Sample C Female 14.7
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
70612725 Antisense, RP_050725_01_C03, Mouse strain C57BL/6J (56 days, male) 3.7
513489 Antisense, RP_040810_01_H09, Mouse strain C57BL/6J (56 days, male) 0.7

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