HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:231.4 nTPM
GTEx:39.8 nTPM
FANTOM5:144.5 Scaled Tags Per Million
Pig:138.3 nTPM
Mouse:114.6 nTPM
Allen mouse:20.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035061Antibody HPA035062
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 231.4
Sample id Sample description nTPM
Hippocampus
nTPM: 192.1
2621 Female, age 67, right hemisphere 259.5
1855 Male, age 76, left hemisphere 202.0
2148 Female, age 91, left hemisphere 182.9
1898 Male, age 80, left hemisphere 179.5
1911 Female, age 85, right hemisphere 169.6
2529 Female, age 94, left hemisphere 159.0
Dentate gyrus
nTPM: 192.3
2531 Female, age 67, both hemispheres 293.7
1927 Female, age 91, both hemispheres 186.1
2246 Female, age 85, both hemispheres 181.5
2010 Male, age 76, both hemispheres 174.1
2530 Female, age 94, left hemisphere 173.7
2528 Male, age 74, both hemispheres 144.5
Entorhinal gyrus
nTPM: 214.3
2613 Female, age 94, left hemisphere 316.5
2764 Male, age 80, right hemisphere 230.0
1787 Male, age 76, left hemisphere 221.9
1938 Female, age 85, left hemisphere 209.3
2686 Male, age 75, right hemisphere 167.4
2117 Female, age 91, right hemisphere 140.8
Hippocampus, CA1
nTPM: 199.1
2749 Male, age 80, left hemisphere 276.9
2045 Male, age 76, both hemispheres 219.3
1873 Female, age 85, both hemispheres 181.5
2527 Male, age 74, both hemispheres 160.1
2082 Female, age 91, right hemisphere 157.8
Hippocampus, CA2
nTPM: 172.8
1963 Male, age 80, left hemisphere 201.0
1892 Male, age 76, both hemispheres 195.1
1940 Female, age 85, left hemisphere 185.8
2113 Female, age 91, right hemisphere 165.7
2437 Female, age 94, left hemisphere 159.9
2249 Male, age 74, both hemispheres 129.1
Hippocampus, CA3
nTPM: 224.6
2620 Female, age 94, left hemisphere 308.5
2861 Female, age 67, both hemispheres 296.5
2137 Male, age 80, left hemisphere 285.6
1867 Male, age 76, both hemispheres 188.3
1891 Female, age 85, both hemispheres 140.6
2436 Male, age 74, both hemispheres 128.4
Parahippocampal cortex
nTPM: 192.5
2245 Female, age 91, both hemispheres 226.3
2622 Female, age 67, right hemisphere 221.9
1850 Male, age 80, both hemispheres 217.5
2693 Female, age 94, both hemispheres 208.5
2532 Female, age 72, left hemisphere 200.6
2018 Male, age 76, both hemispheres 186.8
1933 Female, age 85, both hemispheres 186.4
2250 Female, age 67, right hemisphere 174.1
1990 Female, age 91, right hemisphere 163.9
2692 Male, age 74, both hemispheres 139.2
Perirhinal gyrus
nTPM: 231.4
1794 Male, age 80, right hemisphere 247.7
1847 Female, age 91, left hemisphere 237.9
2521 Female, age 94, right hemisphere 229.8
2848 Male, age 76, right hemisphere 224.0
1841 Female, age 85, right hemisphere 217.7
Subiculum
nTPM: 153.4
1901 Male, age 80, both hemispheres 178.8
1977 Female, age 85, both hemispheres 176.0
2042 Male, age 76, both hemispheres 172.1
2729 Female, age 91, right hemisphere 137.9
2619 Male, age 74, both hemispheres 128.5
2438 Female, age 94, left hemisphere 126.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 96.9
Min nTPM: 5.4
Std nTPM: 14.9
Median nTPM: 38.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 96.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 72.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 72.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 67.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 67.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 66.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 64.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 63.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 63.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 63.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.5
FF:10169-103B7 60 years, female 168.2
FF:10153-102I9 76 years, female 120.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 138.3
Pig sample Sample description nTPM
Subiculum
nTPM: 71.4
Samples: 4

Max nTPM: 85.4
Min nTPM: 60.2
Sample A Female 85.4
Sample B Female 64.8
Sample C Male 75.3
Sample D Male 60.2
Dorsal hippocampus
nTPM: 138.3
Samples: 4

Max nTPM: 164.6
Min nTPM: 91.0
Sample A Female 153.1
Sample B Female 164.6
Sample C Male 91.0
Sample D Male 144.4
Entorhinal cortex
nTPM: 83.9
Samples: 4

Max nTPM: 100.0
Min nTPM: 77.8
Sample A Female 100.0
Sample B Female 79.6
Sample C Male 77.8
Sample D Male 78.1
Ventral hippocampus
nTPM: 111.2
Samples: 4

Max nTPM: 191.0
Min nTPM: 68.6
Sample A Female 82.4
Sample B Female 68.6
Sample C Male 102.7
Sample D Male 191.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.2
Samples: 4

Max nTPM: 70.4
Min nTPM: 59.4
Sample A Male 69.3
Sample B Male 59.4
Sample C Female 70.4
Sample D Female 61.6
Hippocampal formation
nTPM: 114.7
Samples: 4

Max nTPM: 135.3
Min nTPM: 86.4
Sample A Male 86.4
Sample B Male 126.1
Sample C Female 135.3
Sample D Female 110.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.9
69236658 Antisense, RP_050329_04_B05, Mouse strain C57BL/6J (56 days, male) 20.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org